Escherichia coli MBT-5 |
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Putative Escherichia coli MBT-5 RM systems
Ref: Fiedler,G. et al. Microbiol Resour Announc 9 (49), e00973-20 (2020)
REBASE ref # 31836
| Sequence length: | GenBank #: | |
| Chromosome: | 5,705,580 bp | CP058682 |
| plasmid unnamed1: | 92,578 bp | CP058683 |
| plasmid unnamed2: | 89,589 bp | CP058684 |
| plasmid unnamed4: | 6,715 bp | CP058686 |
REBASE acronym: EcoMBT5
Org_num: 46660
All begin HZT35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14100 | 322 aa hypothetical protein | |||
| 14105 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | EcoMBT5ORF14110P |
| 14110 | M | M.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | M.EcoMBT5ORF14110P |
| 14115 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.EcoMBT5ORF14110P |
| 14120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19540 | cell division protein DamX | |||
| 19545 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMBT5DamP |
| 19550 | ribulose-phosphate 3-epimerase | |||
| 20105 | DUF2556 family protein | |||
| 20110 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMBT5ORF20110P |
| 20115 | DNA-binding transcriptional regulator Fis | |||
| 23620 | PerC family transcriptional regulator | |||
| 23625 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoMBT5ORF23625P |
| 23630 | LexA family transcriptional regulator | |||
| 26265 | recombination protein NinB | |||
| 26270 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoMBT5ORF26270P |
| 26275 | NinE family protein | |||
| 28325 | HD domain-containing protein | |||
| 28330 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoMBT5DcmP |
| 28335 | V | V.SflSTLE3DcmP (100% identity) | V.EcoMBT5DcmP | |
| 28340 | drug/metabolite exporter YedA | |||
| 28865 | TrmB family transcriptional regulator | |||
| 28870 | M | M.EcoZ1836ORF11435P (100% identity) | M.EcoMBT5ORF28870P | |
| 28890 | Shiga toxin Stx2a subunit A | |||
| 5950 | DUF3927 family protein | |||
| 5965 | M | M.Eco973250ORFDP (100% identity) | M.EcoMBT5ORF5965P | |
| 5970 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 29080 | 103 aa hypothetical protein | |||
| 29085 | M | M.EcopO26ORF185P (100% identity) | SAY | M.EcoMBT5ORF29085P |
| 29090 | 72 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 29540 | 85 aa hypothetical protein | |||
| 29545 | M | M.EcoF1273ORF28945P (100% identity) | M.EcoMBT5ORF29545P | |
| 29550 | recombination-associated protein RdgC | |||
| 29955 | ead/Ea22-like family protein | |||
| 29960 | M | M.Eco3244ORF18810P (99% identity) | M.EcoMBT5ORF29960P | |
| 29965 | ead/Ea22-like family protein | |||
| plasmid unnamed4 | ||||
| 30155 | M | M.Sen64991ORFAP (100% identity) | M.EcoMBT5ORF30155P | |
| 30160 | R | Eco0001ORF31580P (100% identity) | EcoMBT5ORF30155P | |
| 30165 | 127 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14120 | endoribonuclease SymE | |||
| 14125 | R | EcoSTEC508GmrSDP (100% identity) | EcoMBT5GmrSDP | |
| 14130 | DUF1127 domain-containing protein | |||