Escherichia coli V7 |
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Putative Escherichia coli V7 RM systems
Ref: Biggel,M. et al. Nat Commun 11 (1), 5968 (2020)
REBASE ref # 31804
| Sequence length: | GenBank #: | |
| Chromosome: | 4,995,716 bp | CP048855 |
| plasmid pV7_BUTI_Uro_1: | 70,473 bp | CP048856 |
REBASE acronym: EcoV7
Org_num: 46814
All begin G4273_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19540 | restriction endonuclease | |||
| ??? | M | M.Eco1258ORF18025P (100% identity) | GGYANNNNNGTNG | M.EcoV7ORF19545P |
| 19550 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoV7ORF19545P |
| 19555 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoV7ORF19545P |
| 19560 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoV7DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 domain-containing protein | |||
| 2295 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoV7ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9740 | phosphohydrolase | |||
| 9745 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoV7DcmP |
| 9750 | V | V.EcosC25DcmP (100% identity) | V.EcoV7DcmP | |
| 9755 | drug/metabolite exporter YedA | |||
| 16050 | 71 aa hypothetical protein | |||
| 16055 | M | M.Sen21974ORF23385P (100% identity) | M.EcoV7ORF16055P | |
| 16060 | 145 aa hypothetical protein | |||
| 20075 | conjugal transfer protein TraG | |||
| 20080 | M | M.EcosS3ORF15775P (100% identity) | M.EcoV7ORF20080P | |
| 20085 | R | EcosS3ORF15775P (100% identity) | EcoV7ORF20080P | |
| 20090 | 527 aa hypothetical protein | |||
| plasmid pV7_BUTI_Uro_1 | ||||
| 23810 | 103 aa hypothetical protein | |||
| 23815 | M | M.Sfl7ORF23565P (100% identity) | M.EcoV7ORF23815P | |
| 23820 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13545 | NinE family protein | |||
| 13550 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoV7ORF13550P |
| 13555 | recombination protein NinB | |||