Escherichia coli US32 |
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Putative Escherichia coli US32 RM systems
Ref: Biggel,M. et al. Nat Commun 11 (1), 5968 (2020)
REBASE ref # 31804
Complete sequence: 5,317,156 bp
GenBank #: CP048606
REBASE acronym: EcoUS32
Org_num: 46812
All begin GNX72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21375 | DUF262 domain-containing protein | |||
| 21380 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoUS32ORF21385P |
| 21385 | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoUS32ORF21385P |
| 21390 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoUS32ORF21385P |
| 21395 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoUS32DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 domain-containing protein | |||
| 2385 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoUS32ORF2385P |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 9880 | phosphohydrolase | |||
| 9885 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoUS32DcmP |
| 9890 | V | V.EcosC25DcmP (100% identity) | V.EcoUS32DcmP | |
| 9895 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21605 | ATP-binding domain-containing protein | |||
| 21610 | M | M.EcoUTI89I (99% identity) | CACAG | M.EcoUS32ORF21610P |
| 21615 | R | EcoUTI89IP (100% identity) | CACAG | EcoUS32ORF21610P |
| 21620 | integrase arm-type DNA-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10960 | recombination protein NinB | |||
| 10965 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoUS32ORF10965P |
| 10970 | NinE family protein | |||