Escherichia coli Eco-15 |
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Putative Escherichia coli Eco-15 RM systems
Ref: Kohler,P. et al. Sci Rep 10 (1), 18580 (2020)
REBASE ref # 31663
| Sequence length: | GenBank #: | |
| Chromosome: | 4,771,912 bp | CP047710 |
| plasmid pEco15-1: | 152,546 bp | CP047711 |
| plasmid pEco15-2: | 123,643 bp | CP047712 |
| plasmid pEco15-3: | 68,886 bp | CP047713 |
REBASE acronym: Ecoco15
Org_num: 46578
All begin GVI77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17290 | 267 aa hypothetical protein | |||
| 17295 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Ecoco15ORF17300P |
| 17300 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Ecoco15ORF17300P |
| 17305 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Ecoco15ORF17300P |
| 17310 | 210 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecoco15DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 domain-containing protein | |||
| 2295 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecoco15ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9210 | phosphohydrolase | |||
| 9215 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Ecoco15DcmP |
| 9220 | V | V.SflC32DcmP (74% identity) | V.Ecoco15DcmP | |
| 9225 | drug/metabolite exporter YedA | |||
| 19190 | restriction endonuclease | |||
| 19195 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Ecoco15ORF19200P |
| 19200 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Ecoco15ORF19200P |
| 19205 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Ecoco15ORF19200P |
| 19210 | helix-turn-helix domain-containing protein | |||
| 19475 | 174 aa hypothetical protein | |||
| 19480 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Ecoco15ORF19480P |
| 19485 | histidine kinase | |||
| 19490 | 607 aa hypothetical protein | |||
| 19495 | R | Ecos19ORF20635P (100% identity) | Ecoco15ORF19495P | |
| 19500 | 97 aa hypothetical protein | |||
| plasmid pEco15-1 | ||||
| 23145 | 100 aa hypothetical protein | |||
| 23150 | M | M.Sma0cORF5065P (100% identity) | M.Ecoco15ORF23150P | |
| 23155 | 158 aa hypothetical protein | |||
| plasmid pEco15-2 | ||||
| 24215 | 73 aa hypothetical protein | |||
| 24220 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Ecoco15ORF24220P |
| 24225 | 102 aa hypothetical protein | |||
| plasmid pEco15-3 | ||||
| 24400 | 102 aa hypothetical protein | |||
| 24405 | M | M.Sfl7ORF23565P (100% identity) | M.Ecoco15ORF24405P | |
| 24410 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19180 | glycosyltransferase | |||
| 19185 | R | EcosS3McrBP (100% identity) | Ecoco15McrBP | |
| 19190 | R | EcosS9McrCP (100% identity) | Ecoco15McrCP | |
| 19195 | Alw26I/Eco31I/Esp3I family type II restriction | |||