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Putative Synechococcus species CBW1004 RM systems
Ref: Fucich,D. et al. unpublished
REBASE ref # 32466
Complete sequence: 3,672,318 bp
GenBank #: CP060397
REBASE acronym: Ssp1004
Org_num: 49534
All begin H8F25_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4280 | transposase | |||
4285 | M | M.SspLA31ORF1950P (83% identity) | M.Ssp1004ORF4285P | |
4290 | 57 aa hypothetical protein | |||
6980 | 66 aa hypothetical protein | |||
6985 | M | M.Ssp9902ORF468P (78% identity) | M.Ssp1004ORF6985P | |
6990 | S | S.Sca17387ORF35000P (35% identity) | S.Ssp1004ORF6985P | |
6995 | R | Ssp9902ORF468P (83% identity) | Ssp1004ORF6985P | |
7000 | M48 family metallopeptidase | |||
7860 | bifunctional hydroxymethylpyrimidine | |||
7865 | M | M.Ssp1006ORF9595P (82% identity) | M.Ssp1004ORF7865P | |
7870 | S | S.BglBBB01ORFBP (39% identity) | S.Ssp1004ORF7865P | |
7875 | IS5 family transposase | |||
7880 | 66 aa hypothetical protein | |||
7885 | 130 aa hypothetical protein | |||
7890 | 74 aa hypothetical protein | |||
7895 | type II toxin-antitoxin system VapC family | |||
7900 | R | Ssp1002ORF1870P (76% identity) | Ssp1004ORF7865P | |
7905 | 183 aa hypothetical protein | |||
11145 | 310 aa hypothetical protein | |||
11150 | R | Csp14ORF8935P (51% identity) | Ssp1004ORF11155P | |
11155 | M | M.Csp14ORF8935P (75% identity) | M.Ssp1004ORF11155P | |
11160 | S | S.RcaY262ORF8005P (47% identity) | S.Ssp1004ORF11155P | |
11165 | AAA family ATPase | |||
13260 | 45 aa hypothetical protein | |||
13265 | R | Csp14ORF15110P (76% identity) | Ssp1004ORF13300P | |
13270 | Uma2 family endonuclease | |||
13275 | HigA family addiction module antidote protein | |||
13280 | AbrB/MazE/SpoVT family DNA-binding | |||
13285 | type II toxin-antitoxin system VapC family | |||
13290 | type II toxin-antitoxin system HicB family | |||
13295 | type II toxin-antitoxin system HicA family | |||
13300 | M | M.Ssp1006ORF15865P (82% identity) | M.Ssp1004ORF13300P | |
13305 | S | S.SarUORFMP (16% identity) | S1.Ssp1004ORF13300P | |
13310 | IS5 family transposase | |||
13315 | S | S2.Ssp1006ORF15865P (29% identity) | S2.Ssp1004ORF13300P | |
13320 | IS5 family transposase | |||
13325 | S | S.MkoLM6ORF3736P (24% identity) | S3.Ssp1004ORF13300P | |
13330 | DUF4114 domain-containing protein | |||
14290 | 125 aa hypothetical protein | |||
14295 | M | M.GspM18ORF2872P (13% identity) | M.Ssp1004ORF14295AP | |
14305 | M | M.TspFBIII (72% identity) | M.Ssp1004ORF14295BP | |
14310 | type II toxin-antitoxin system RelE/ParE family | |||
14315 | HigA family addiction module antidote protein | |||
14320 | nucleotidyltransferase domain-containing | |||
14325 | HEPN domain-containing protein | |||
14330 | S | S.Uba827748ORFAP (38% identity) | S1.Ssp1004ORF14295P | |
14335 | DUF4268 domain-containing protein | |||
14340 | S | S3.Pki5BTORF17175P (75% identity) | S2.Ssp1004ORF14295P | |
14345 | R | TspFBIIIP (67% identity) | Ssp1004ORF14295P | |
14350 | 211 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1955 | DNA binding domain-containing protein | |||
1960 | RM | SspA1544ORF570P (55% identity) | Ssp1004ORF1960P | |
1965 | BREX system P-loop protein BrxC | |||
9190 | DUF2442 domain-containing protein | |||
9195 | RM | Cgr6307ORF239P (79% identity) | Ssp1004ORF9195P | |
9200 | DEAD/DEAH box helicase |