Escherichia coli 20 |
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Putative Escherichia coli 20 RM systems
Ref: Jovanovic,O. and Shang,C. unpublished
REBASE ref # 31496
| Sequence length: | GenBank #: | |
| Chromosome: | 5,163,897 bp | CP064847 |
| plasmid pHK01-1: | 130,181 bp | CP064848 |
REBASE acronym: EcoJ20
Org_num: 46505
All begin IPT86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2625 | toll/interleukin-1 receptor domain-containing | |||
| 2630 | M | M1.Sbo812ORFDP (93% identity) | M1.EcoJ20ORF2630P | |
| 2635 | M | M2.Sbo812ORFDP (100% identity) | M2.EcoJ20ORF2630P | |
| 2640 | S | S.Sbo812ORFDP (97% identity) | S.EcoJ20ORF2630P | |
| 2645 | R | EcoTCM3e1ORF20315P (100% identity) | EcoJ20ORF2630P | |
| 2650 | N-6 DNA methylase | |||
| 20055 | transposase | |||
| 20060 | R | SflSTLE3ORF22785P (100% identity) | EcoJ20ORF20075P | |
| 20065 | DUF4268 domain-containing protein | |||
| 20070 | S | S.SflFF64ORF5405P (100% identity) | S.EcoJ20ORF20075P | |
| 20075 | M | M.SflFF64ORF5405P (100% identity) | M.EcoJ20ORF20075P | |
| 20080 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4470 | PerC family transcriptional regulator | |||
| 4475 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoJ20ORF4475P |
| 4480 | LexA family transcriptional regulator | |||
| 9260 | phosphohydrolase | |||
| 9265 | M | M.SspPIBDcmP (100% identity) | CCWGG | M.EcoJ20DcmP |
| 9270 | V | V.EcoWW2DcmP (100% identity) | V.EcoJ20DcmP | |
| 9275 | drug/metabolite exporter YedA | |||
| 17080 | PerC family transcriptional regulator | |||
| 17085 | M | M.EcoTCM3e1ORF6790P (100% identity) | M.EcoJ20ORF17085P | |
| 17090 | serine/threonine protein phosphatase | |||
| 21175 | DNA-binding transcriptional regulator Fis | |||
| 21180 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoJ20ORF21180P |
| 21185 | DUF2556 family protein | |||
| 21705 | ribulose-phosphate 3-epimerase | |||
| 21710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJ20DamP |
| 21715 | cell division protein DamX | |||
| plasmid pHK01-1 | ||||
| 25505 | 73 aa hypothetical protein | |||
| 25510 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoJ20ORF25510P |
| 25515 | 103 aa hypothetical protein | |||