Escherichia coli isolate L3_CS7_E2980 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli isolate L3_CS7_E2980 RM systems
Ref: Page,A. and Bastkowski,S. unpublished
REBASE ref # 31576
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,992,286 bp | LR882978 |
| plasmid 2: | 112,055 bp | LR882979 |
| plasmid 3: | 72,255 bp | LR882980 |
REBASE acronym: Eco2980
Org_num: 45918
All begin ETECE2980_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 677 | cell division protein DamX | |||
| 678 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2980DamP |
| 679 | ribulose-phosphate | |||
| 792 | 59 aa hypothetical protein BvCmsA139A_01858 | |||
| 793 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco2980ORF793P |
| 794 | DNA-binding transcriptional regulator Fis | |||
| 1221 | AAA ATPase domain protein | |||
| 1222 | R | EcoDLI5aORF8980P (100% identity) | Eco2980ORF1223P | |
| 1223 | M | M.EcoR37ORF3180P (100% identity) | M.Eco2980ORF1223P | |
| 1224 | phage integrase | |||
| 1907 | ead/Ea22-like family protein | |||
| 1908 | M | M.EcoEcC25ORFAP (100% identity) | M.Eco2980ORF1908P | |
| 1909 | 50 aa hypothetical protein | |||
| 1934 | prophage protein ninB | |||
| 1935 | M | M.Eco9280ORFHP (95% identity) | GATC | M.Eco2980ORF1935P |
| 1936 | DUF1364 family protein | |||
| 2359 | phosphohydrolase | |||
| 2360 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2980DcmP |
| 2361 | V | V.SsoSE61DcmP (100% identity) | V.Eco2980DcmP | |
| 2362 | drug/metabolite exporter YedA | |||
| 3290 | 74 aa hypothetical protein AWP61_20605 | |||
| 3294 | M | M.EcoETECORF1210P (100% identity) | M.Eco2980ORF3294P | |
| 3295 | 65 aa hypothetical protein ECDEC11D_2366 | |||
| 3970 | 53 aa hypothetical protein EC09BKT76207_2543 | |||
| 3971 | M | M.Sbo812ORFAP (100% identity) | M.Eco2980ORF3971P | |
| 3972 | DUF1382 family protein | |||
| 4627 | sialate O-acetylesterase | |||
| 4628 | R | EcoPK8566ORF2340P (100% identity) | Eco2980ORF4628P | |
| 4629 | 332 aa hypothetical protein | |||
| 4632 | 1213 aa conserved hypothetical protein | |||
| 4633 | RM | EcoFP2ORF70P (99% identity) | CRARCAG | Eco2980ORF4633P |
| 4634 | 865 aa hypothetical protein AZ037_000236 | |||
| 4780 | 374 aa hypothetical protein | |||
| 4781 | M | M.Kpn80191ORFAP (100% identity) | CTGAAG | M.Eco2980ORF4781P |
| 4782 | 60 aa hypothetical protein | |||
| plasmid 2 | ||||
| ??? | M | M.Eco9280ORFGP (100% identity) | M.Eco2980ORFBP | |
| 269 | Protein of uncharacterised function (DUF1380) | |||
| plasmid 3 | ||||
| 73 | protein stbB,Plasmid stability protein | |||
| ??? | M | M.Sen143ORF26480P (100% identity) | M.Eco2980ORFAP | |
| 82 | Uncharacterised protein | |||