Escherichia coli isolate MINF_8D-sc-2280460 |
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Putative Escherichia coli isolate MINF_8D-sc-2280460 RM systems
Ref: Hawkey,J. unpublished
REBASE ref # 31476
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,843,422 bp | LR890606 |
| plasmid 2: | 126,618 bp | LR890607 |
| plasmid 3: | 115,278 bp | LR890608 |
| plasmid 4: | 89,833 bp | LR890609 |
REBASE acronym: Eco0460
Org_num: 45497
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid 2 | ||||
| ??? | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco0460ORFFP |
| ??? | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco0460ORFFP |
| ??? | M | M.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | M.Eco0460ORFFP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco0460ORFEP |
| ??? | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco0460ORFEP |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0460DamP |
| ??? | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco0460ORFBP |
| ??? | M | M.Ecoppa8DcmP (100% identity) | CCWGG | M.Eco0460DcmP |
| ??? | V | V.SflSTLE3DcmP (100% identity) | V.Eco0460DcmP | |
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco0460ORFJP | |
| ??? | M | M.Sen58011ORF9805P (100% identity) | M.Eco0460ORFAP | |
| ??? | M | M.SflFF80ORF18305P (100% identity) | GATC | M.Eco0460ORFHP |
| plasmid 2 | ||||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco0460ORFDP |
| plasmid 4 | ||||
| ??? | M | M.Sso866ORF27155P (100% identity) | M.Eco0460ORFCP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | SflN116ORF19490P (100% identity) | Eco0460ORFGP | |
| ??? | M | M.SflN116ORF19490P (52% identity) | M.Eco0460ORFGBP | |
| ??? | M | M.EcoST05ORF50220P (47% identity) | M.Eco0460ORFGAP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | Efe35473GmrSDP (99% identity) | Eco0460GmrSDP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid 3 | ||||
| ??? | M | M.Sso524ORF460P (100% identity) | M.Eco0460ORFIP | |