Escherichia coli isolate MSB1_3B-sc-2280406 |
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Putative Escherichia coli isolate MSB1_3B-sc-2280406 RM systems
Ref: Hawkey,J. unpublished
REBASE ref # 31476
| Sequence length: | GenBank #: | |
| chromosome 1: | 5,173,861 bp | LR890299 |
| plasmid 2: | 160,467 bp | LR890300 |
| plasmid 3: | 70,656 bp | LR890301 |
REBASE acronym: Eco406
Org_num: 45500
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | Eco406ORFDP |
| ??? | M | M.SflTORF4636P (100% identity) | CCANNNNNNNNNTTGG | M.Eco406ORFDP |
| ??? | S | S.EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | S.Eco406ORFDP |
| ??? | M | M.EcoZ151ORF20915P (100% identity) | M.Eco406ORFBP | |
| ??? | S | S.EcoZ151ORF20915P (100% identity) | S.Eco406ORFBP | |
| ??? | R | EcoZ151ORF20915P (100% identity) | Eco406ORFBP | |
| plasmid 2 | ||||
| ??? | R | Eco0394ORFFP (100% identity) | CAAYNNNNNNCTGG | Eco406ORFGP |
| ??? | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco406ORFGP |
| ??? | M | M.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | M.Eco406ORFGP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco406DcmP |
| ??? | V | V.EcosE1DcmP (74% identity) | V.Eco406DcmP | |
| ??? | R | EcoZ151ORF20895P (100% identity) | Eco406ORFCP | |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco406DamP |
| ??? | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco406ORFAP |
| plasmid 2 | ||||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco406ORFEP |
| plasmid 3 | ||||
| ??? | M | M.Xca80ORFEP (100% identity) | M.Eco406ORFFP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | EcoCh1GmrSDP (100% identity) | Eco406GmrSDP | |
| ??? | R | EcoZ151McrCP (100% identity) | Eco406McrCP | |
| ??? | R | EcoZ151McrBP (100% identity) | Eco406McrBP | |