Escherichia coli THO-008 |
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Putative Escherichia coli THO-008 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 31386
| Sequence length: | GenBank #: | |
| Chromosome: | 5,071,981 bp | AP022536 |
| Chromosome: | 5,071,981 bp | AP019538 |
| plasmid pTHO-008_1: | 151,109 bp | AP019539 |
| plasmid pTHO-008-1: | 151,109 bp | AP022537 |
REBASE acronym: EcoTHO008
Org_num: 45275
All begin ECTHO008_, ECTHO008_p, THOESC008_, THOESC008_P
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3560 | cell division protein DamX | |||
| 3570 | M | M.Fnu048ORFTP (100% identity) | GATC | M.EcoTHO008DamP |
| 3580 | ribulose-phosphate 3-epimerase | |||
| 4600 | 59 aa hypothetical protein | |||
| ??? | M | M.EcoSC457ORFAP (100% identity) | ATGCAT | M.EcoTHO008ORF4610P |
| 4620 | DNA-binding protein Fis | |||
| 18250 | phosphohydrolase | |||
| 18260 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoTHO008DcmP |
| 18270 | V | V.Fnu048DcmP (100% identity) | V.EcoTHO008DcmP | |
| 18280 | inner membrane transporter YedA | |||
| 36570 | 568 aa hypothetical protein | |||
| 36580 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcoTHO008ORF36580P |
| 36590 | integrase | |||
| 40120 | RM | Fnu048ORFEP (100% identity) | EcoTHO008ORF40120P | |
| 40130 | ATP-dependent helicase | |||
| 40210 | 216 aa hypothetical protein | |||
| 40220 | R | Fnu048ORFUP (96% identity) | EcoTHO008ORF40220P | |
| 40230 | 154 aa hypothetical protein | |||
| Chromosome | ||||
| 4600 | 59 aa hypothetical protein | |||
| 4610 | M | M.Fnu048ORFDP (100% identity) | ATGCAT | M.EcoHO008ORF4610P |
| 4620 | DNA-binding protein Fis | |||
| 18230 | phosphohydrolase | |||
| 18240 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoHO008DcmP |
| 18250 | V | V.Fnu048DcmP (100% identity) | V.EcoHO008DcmP | |
| 18260 | inner membrane transporter YedA | |||
| 36500 | 568 aa hypothetical protein | |||
| 36510 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcoHO008ORF36510P |
| 36520 | integrase | |||
| 40020 | RM | Fnu048ORFEP (100% identity) | EcoHO008ORF40020P | |
| 40030 | ATP-dependent helicase | |||
| 40110 | 216 aa hypothetical protein | |||
| 40120 | R | Fnu048ORFUP (96% identity) | EcoHO008ORF40120P | |
| 40130 | 154 aa hypothetical protein | |||
| plasmid pTHO-008_1 | ||||
| 10040 | 308 aa hypothetical protein | |||
| 10050 | M | M.EcoTHO008ORF10050P (100% identity) | M.EcoHO008ORF10050P | |
| 10060 | conjugal transfer protein TraG | |||
| plasmid pTHO-008-1 | ||||
| 10040 | 308 aa hypothetical protein | |||
| 10050 | M | M.EcoHO008ORF10050P (100% identity) | M.EcoTHO008ORF10050P | |
| 10060 | 580 aa hypothetical protein | |||