Escherichia coli isolate 2015-01-466 |
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Putative Escherichia coli isolate 2015-01-466 RM systems
Ref: Haverkamp H.A:,T. unpublished
REBASE ref # 31332
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,569,920 bp | LR882052 |
| plasmid 2: | 113,096 bp | LR882053 |
| plasmid 3: | 87,822 bp | LR882054 |
| plasmid 4: | 50,909 bp | LR882055 |
REBASE acronym: Eco1466
Org_num: 45041
All begin QREC_QR466_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1085 | IS1 family transposase IS1R | |||
| 1086 | R | Ror24150ORF17255P (100% identity) | Eco1466ORF1088P | |
| 1087 | 373 aa hypothetical protein | |||
| 1088 | M | M.Ror24150ORF17255P (100% identity) | M.Eco1466ORF1088P | |
| 1089 | 63 aa hypothetical protein | |||
| plasmid 2 | ||||
| 4467 | 71 aa hypothetical protein | |||
| 4468 | R | EcoR124I (100% identity) | Eco1466ORF4470P | |
| 4469 | 404 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 328 | Cell division protein DamX | |||
| 329 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1466DamP |
| 330 | Ribulose-phosphate 3-epimerase | |||
| 455 | 59 aa hypothetical protein | |||
| 456 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1466ORF456P |
| 457 | DNA-binding protein Fis | |||
| 1725 | protein YedJ | |||
| 1726 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco1466DcmP |
| 1727 | V | V.SsoSE61DcmP (100% identity) | V.Eco1466DcmP | |
| 1728 | inner membrane transporter YedA | |||
| 3702 | 9-O-acetyl-N-acetylneuraminic acid | |||
| 3703 | R | SflSTLE4ORF19250P (100% identity) | Eco1466ORF3703P | |
| 3704 | 436 aa hypothetical protein | |||
| 3755 | Anaerobic nitric oxide reductase transcription | |||
| 3756 | R | EcoYJ3ORFFP (100% identity) | Eco1466ORF3756P | |
| 3757 | 340 aa hypothetical protein | |||
| plasmid 2 | ||||
| 4455 | 73 aa hypothetical protein | |||
| 4456 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco1466ORF4456P |
| 4457 | 308 aa hypothetical protein | |||
| plasmid 3 | ||||
| 4547 | Recombination-associated protein RdgC | |||
| 4548 | M | M.Eco1716ORF25935P (100% identity) | M.Eco1466ORF4548P | |
| 4551 | 78 aa hypothetical protein | |||
| plasmid 4 | ||||
| 4604 | Plasmid segregation protein ParM | |||
| 4605 | M | M.Xca80ORFEP (100% identity) | M.Eco1466ORF4605P | |
| 4606 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3703 | 290 aa hypothetical protein | |||
| 3704 | R | SflSTLE4McrCP (100% identity) | Eco1466McrCP | |
| 3705 | R | Eco9029McrBP (100% identity) | Eco1466McrBP | |
| 3706 | 277 aa hypothetical protein | |||