Escherichia coli O145 RM9154-C1 |
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Putative Escherichia coli O145 RM9154-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
| Sequence length: | GenBank #: | |
| Chromosome: | 5,205,721 bp | CP031353 |
| plasmid p2RM9154-C1: | 96,355 bp | CP031351 |
| plasmid p3RM9154-C1: | 86,711 bp | CP031352 |
REBASE acronym: Eco9154
Org_num: 44685
All begin DXE50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13855 | IS3 family transposase | |||
| ??? | M | M.EcoSO173ORF28895P (86% identity) | M.Eco9154ORF13860P | |
| 13870 | S | S.EcoSO173ORF28895P (95% identity) | S.Eco9154ORF13860P | |
| 13875 | YecA family protein | |||
| 13880 | cold shock domain-containing protein | |||
| 13885 | R | EcoSO173ORF28895P (100% identity) | Eco9154ORF13860P | |
| 13890 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6155 | NinE family protein | |||
| 6160 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco9154ORF6160P |
| 6165 | recombination protein NinB | |||
| 10540 | DUF1382 family protein | |||
| 10545 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco9154ORF10545P |
| 10550 | regulator | |||
| 10670 | DUF4065 domain-containing protein | |||
| 10675 | R | EcoF690ORF30660P (100% identity) | CTGCAG | Eco9154ORF10680P |
| 10680 | M | M.EcoE2863ORF2986P (100% identity) | CTGCAG | M.Eco9154ORF10680P |
| 10685 | LexA family transcriptional regulator | |||
| 13535 | phosphohydrolase | |||
| 13540 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco9154DcmP |
| 13545 | V | V.SsoSE61DcmP (100% identity) | V.Eco9154DcmP | |
| 13550 | drug/metabolite exporter YedA | |||
| 21220 | DNA-binding transcriptional regulator Fis | |||
| 21225 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco9154ORF21225P |
| 21230 | DUF2556 domain-containing protein | |||
| 21755 | ribulose-phosphate 3-epimerase | |||
| 21760 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9154DamP |
| 21765 | cell division protein DamX | |||
| 25080 | 77 aa hypothetical protein | |||
| 25085 | M | M.SflFF35ORF20P (100% identity) | M.Eco9154ORF25085P | |
| 25090 | 330 aa hypothetical protein | |||
| 27345 | 59 aa hypothetical protein | |||
| 27350 | R | EcoE115ORF5147P (100% identity) | Eco9154ORF27350P | |
| 27355 | N-acetylneuraminate epimerase | |||
| 27385 | DEAD/DEAH box helicase | |||
| 27390 | RM | EcoE115ORF5155P (100% identity) | Eco9154ORF27390P | |
| plasmid p2RM9154-C1 | ||||
| 1665 | 61 aa hypothetical protein | |||
| 1680 | M | M.EcoH8ORF24485P (100% identity) | M.Eco9154ORF1680P | |
| 1685 | IS3-like element IS629 family transposase | |||
| plasmid p3RM9154-C1 | ||||
| 1990 | 102 aa hypothetical protein | |||
| 1995 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco9154ORF1995P |
| 2000 | 72 aa hypothetical protein | |||