Escherichia coli O145 RM9873-C1 |
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Putative Escherichia coli O145 RM9873-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
| Sequence length: | GenBank #: | |
| Chromosome: | 5,385,819 bp | CP031347 |
| plasmid pRM9873-C1: | 89,515 bp | CP031346 |
REBASE acronym: Eco9873
Org_num: 44687
All begin DXE52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13140 | M48 family metallopeptidase | |||
| 13145 | R | EcoSO173ORF28895P (100% identity) | Eco9873ORF13165P | |
| 13150 | cold shock domain-containing protein | |||
| 13155 | YecA family protein | |||
| 13160 | S | S.EcoSO173ORF28895P (95% identity) | S.Eco9873ORF13165P | |
| 13165 | M | M.EcoSO173ORF28895P (86% identity) | M.Eco9873ORF13165P | |
| 13170 | IS3-like element IS629 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4450 | recombination protein NinB | |||
| 4455 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco9873ORF4455P |
| 4460 | NinE family protein | |||
| 12785 | Shiga toxin Stx2 subunit A | |||
| 12805 | M | M.EcoE115ORF1522P (100% identity) | M.Eco9873ORF12805P | |
| 12810 | TrmB family transcriptional regulator | |||
| 13455 | drug/metabolite exporter YedA | |||
| 13460 | V | V.SsoSE61DcmP (100% identity) | V.Eco9873DcmP | |
| 13465 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco9873DcmP |
| 13470 | phosphohydrolase | |||
| 20655 | DNA-binding transcriptional regulator Fis | |||
| 20660 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco9873ORF20660P |
| 20665 | DUF2556 domain-containing protein | |||
| 21190 | ribulose-phosphate 3-epimerase | |||
| 21195 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9873DamP |
| 21200 | cell division protein DamX | |||
| 24415 | 77 aa hypothetical protein | |||
| 24420 | M | M.SflFF35ORF20P (100% identity) | M.Eco9873ORF24420P | |
| 24425 | 330 aa hypothetical protein | |||
| 26710 | 59 aa hypothetical protein | |||
| 26715 | R | EcoE115ORF5147P (100% identity) | Eco9873ORF26715P | |
| 26720 | N-acetylneuraminate epimerase | |||
| 26750 | DEAD/DEAH box helicase | |||
| 26755 | RM | EcoE115ORF5155P (100% identity) | Eco9873ORF26755P | |
| plasmid pRM9873-C1 | ||||
| 225 | 72 aa hypothetical protein | |||
| 230 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco9873ORF230P |
| 235 | 102 aa hypothetical protein | |||