Escherichia coli O145 RM12367-C1 |
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Putative Escherichia coli O145 RM12367-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
| Sequence length: | GenBank #: | |
| Chromosome: | 5,472,396 bp | CP031345 |
| plasmid pRM12367-C1: | 90,831 bp | CP031344 |
REBASE acronym: Eco12367
Org_num: 44680
All begin DXE53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13840 | M48 family metallopeptidase | |||
| 13845 | R | EcoSO173ORF28895P (100% identity) | Eco12367ORF13865P | |
| 13850 | cold shock domain-containing protein | |||
| 13855 | YecA family protein | |||
| 13860 | S | S.EcoSO173ORF28895P (95% identity) | S.Eco12367ORF13865P | |
| 13865 | M | M.EcoSO173ORF28895P (86% identity) | M.Eco12367ORF13865P | |
| 13870 | IS3-like element IS629 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4455 | recombination protein NinB | |||
| 4460 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco12367ORF4460P |
| 4465 | NinE family protein | |||
| 8800 | TrmB family transcriptional regulator | |||
| 8805 | M | M.EcoE115ORF1522P (100% identity) | M.Eco12367ORF8805P | |
| 8825 | Shiga toxin Stx2 subunit A | |||
| 9195 | TrmB family transcriptional regulator | |||
| 9200 | M | M.EcoDEC11CORF5871P (100% identity) | M.Eco12367ORF9200P | |
| 9205 | DUF1737 domain-containing protein | |||
| 13485 | Shiga toxin Stx2 subunit A | |||
| 13505 | M | M.EcoE115ORF1522P (100% identity) | M.Eco12367ORF13505P | |
| 13510 | TrmB family transcriptional regulator | |||
| 14155 | drug/metabolite exporter YedA | |||
| 14160 | V | V.SsoSE61DcmP (100% identity) | V.Eco12367DcmP | |
| 14165 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco12367DcmP |
| 14170 | phosphohydrolase | |||
| 21325 | DNA-binding transcriptional regulator Fis | |||
| 21330 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco12367ORF21330P |
| 21335 | DUF2556 domain-containing protein | |||
| 21860 | ribulose-phosphate 3-epimerase | |||
| 21865 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12367DamP |
| 21870 | cell division protein DamX | |||
| 25080 | 77 aa hypothetical protein | |||
| 25085 | M | M.SflFF35ORF20P (100% identity) | M.Eco12367ORF25085P | |
| 25090 | 330 aa hypothetical protein | |||
| 27375 | 59 aa hypothetical protein | |||
| 27380 | R | EcoE115ORF5147P (100% identity) | Eco12367ORF27380P | |
| 27385 | N-acetylneuraminate epimerase | |||
| 27415 | DEAD/DEAH box helicase | |||
| 27420 | RM | EcoE115ORF5155P (100% identity) | Eco12367ORF27420P | |
| plasmid pRM12367-C1 | ||||
| 235 | 72 aa hypothetical protein | |||
| 240 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco12367ORF240P |
| 245 | 102 aa hypothetical protein | |||