Escherichia coli O145 RM10425-C1 |
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Putative Escherichia coli O145 RM10425-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
| Sequence length: | GenBank #: | |
| Chromosome: | 5,343,037 bp | CP031343 |
| plasmid pRM10425-C1: | 89,519 bp | CP031342 |
REBASE acronym: Eco10425
Org_num: 44677
All begin DXE54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6400 | IS3-like element IS629 family transposase | |||
| ??? | M | M.EcoSO173ORF28895P (86% identity) | M.Eco10425ORF6405P | |
| 6415 | S | S.EcoSO173ORF28895P (95% identity) | S.Eco10425ORF6405P | |
| 6420 | YecA family protein | |||
| 6425 | cold shock domain-containing protein | |||
| 6430 | R | EcoSO173ORF28895P (100% identity) | Eco10425ORF6405P | |
| 6435 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4440 | recombination protein NinB | |||
| 4445 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco10425ORF4445P |
| 4450 | NinE family protein | |||
| 6100 | phosphohydrolase | |||
| 6105 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco10425DcmP |
| 6110 | V | V.SsoSE61DcmP (100% identity) | V.Eco10425DcmP | |
| 6115 | drug/metabolite exporter YedA | |||
| 6765 | TrmB family transcriptional regulator | |||
| 6770 | M | M.EcoE115ORF1522P (100% identity) | M.Eco10425ORF6770P | |
| 6790 | Shiga toxin Stx2 subunit A | |||
| 20425 | DNA-binding transcriptional regulator Fis | |||
| 20430 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco10425ORF20430P |
| 20435 | DUF2556 domain-containing protein | |||
| 20960 | ribulose-phosphate 3-epimerase | |||
| 20965 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10425DamP |
| 20970 | cell division protein DamX | |||
| 24180 | 77 aa hypothetical protein | |||
| 24185 | M | M.SflFF35ORF20P (100% identity) | M.Eco10425ORF24185P | |
| 24190 | 330 aa hypothetical protein | |||
| 26475 | 59 aa hypothetical protein | |||
| 26480 | R | EcoE115ORF5147P (100% identity) | Eco10425ORF26480P | |
| 26485 | N-acetylneuraminate epimerase | |||
| 26515 | DEAD/DEAH box helicase | |||
| 26520 | RM | EcoE115ORF5155P (100% identity) | Eco10425ORF26520P | |
| plasmid pRM10425-C1 | ||||
| 295 | 102 aa hypothetical protein | |||
| 300 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco10425ORF300P |
| 305 | 72 aa hypothetical protein | |||