Escherichia coli DA61218 |
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Putative Escherichia coli DA61218 RM systems
Ref: Pereira,C. et al. unpublished
REBASE ref # 31263
| Sequence length: | GenBank #: | |
| Chromosome: | 5,117,558 bp | CP061206 |
| plasmid pDA61218-116: | 116,466 bp | CP061207 |
REBASE acronym: Eco61218
Org_num: 44670
All begin ICI53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5885 | DUF262 domain-containing protein | |||
| 5890 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco61218ORF5895P |
| 5895 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco61218ORF5895P |
| 5900 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco61218ORF5895P |
| 5905 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6260 | BREX-1 system phosphatase PglZ type A | |||
| 6265 | RM | EcoSCU112ORF20670P (100% identity) | Eco61218ORF6265P | |
| 6270 | BREX system P-loop protein BrxC | |||
| 7235 | 527 aa hypothetical protein | |||
| 7240 | R | EcosS3ORF15775P (100% identity) | Eco61218ORF7245P | |
| 7245 | M | M.EcosS3ORF15775P (100% identity) | M.Eco61218ORF7245P | |
| 7250 | conjugal transfer protein TraG N-terminal | |||
| 11535 | cell division protein DamX | |||
| 11540 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco61218DamP |
| 11545 | ribulose-phosphate 3-epimerase | |||
| 12135 | DUF2556 family protein | |||
| 12140 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco61218ORF12140P |
| 12145 | DNA-binding transcriptional regulator Fis | |||
| 19280 | phosphohydrolase | |||
| 19285 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco61218DcmP |
| 19290 | V | V.EcosC25DcmP (100% identity) | V.Eco61218DcmP | |
| 19295 | drug/metabolite exporter YedA | |||
| plasmid pDA61218-116 | ||||
| 24705 | 73 aa hypothetical protein | |||
| 24710 | M | M.Sfl2142ORF380P (100% identity) | M.Eco61218ORF24710P | |
| 24715 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6115 | ATP-binding domain-containing protein | |||
| 6120 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco61218ORF6120P |
| 6125 | R | EcoUTI89IP (100% identity) | CACAG | Eco61218ORF6120P |
| 6130 | integrase arm-type DNA-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23165 | NinE family protein | |||
| 23170 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco61218ORF23170P |
| 23175 | recombination protein NinB | |||