Escherichia coli O25b:H4-ST131 2017_APHA |
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Putative Escherichia coli O25b:H4-ST131 2017_APHA RM systems
Ref: Duggett,N.A. et al. unpublished
REBASE ref # 31113
| Sequence length: | GenBank #: | |
| Chromosome: | 4,988,271 bp | CP051615 |
| plasmid pAPHA_2017_1: | 134,872 bp | CP051616 |
REBASE acronym: EcoST131
Org_num: 13356
All begin HHM36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16640 | endoribonuclease SymE | |||
| 16645 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoST131ORF12815P |
| 16650 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoST131ORF12815P |
| 16655 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoST131ORF12815P |
| 16660 | restriction endonuclease | |||
| 18440 | ash family protein | |||
| 18445 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoST131ORF9545P |
| 18450 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoST131ORF9545P |
| 18455 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoST131ORF9545P |
| 18460 | 267 aa hypothetical protein | |||
| plasmid pAPHA_2017_1 | ||||
| 24735 | IS1 family transposase | |||
| 24740 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoST131ORF24645P |
| 24745 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoST131ORF24645P |
| 24750 | type I restriction-modification system subunit | |||
| 24745 | restriction endonuclease subunit S | |||
| 24750 | M | M.SenceORFJP (99% identity) | M.EcoST131ORF24750P | |
| 24755 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3410 | drug/metabolite exporter YedA | |||
| 3415 | V | V.SflC32DcmP (74% identity) | V.EcoST131DcmP | |
| 3420 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoST131DcmP |
| 3425 | phosphohydrolase | |||
| 10525 | DNA-binding transcriptional regulator Fis | |||
| 10530 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoST131ORF8850P |
| 10535 | DUF2556 family protein | |||
| 11135 | ribulose-phosphate 3-epimerase | |||
| 11140 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoST131DamP |
| 11145 | cell division protein DamX | |||
| 16290 | helix-turn-helix domain-containing protein | |||
| 16295 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoST131ORF16295P |
| 16300 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoST131ORF16295P |
| 16305 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoST131ORF16295P |
| 16310 | McrC family protein | |||
| 21680 | 71 aa hypothetical protein | |||
| 21685 | M | M.KpnYN1ORFGP (89% identity) | M.EcoST131ORF12120P | |
| 21690 | helix-turn-helix transcriptional regulator | |||
| 23945 | TrmB family transcriptional regulator | |||
| 23950 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoST131ORF8965P |
| 23965 | DUF3927 family protein | |||
| plasmid pAPHA_2017_1 | ||||
| 24675 | 73 aa hypothetical protein | |||
| 24680 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoST131ORF20010P |
| 24685 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16305 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16310 | R | EcosS9McrCP (100% identity) | EcoST131McrCP | |
| 16315 | R | EcosS3McrBP (100% identity) | EcoST131McrBP | |
| 16320 | glycosyltransferase family 2 protein | |||