Shigella boydii 600657 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Shigella boydii 600657 RM systems
Ref: Hazen,T.H. et al. unpublished
REBASE ref # 31130
Complete sequence: 4,589,517 bp
GenBank #: CP049281
REBASE acronym: Sbo600657
Org_num: 44219
All begin G5S55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2145 | IS1 family transposase | |||
| 2150 | R | SboSH129ORF19645P (100% identity) | GGANNNNNNCTTT | Sbo600657ORF2155P |
| 2155 | M | M.Sso30807I (100% identity) | GGANNNNNNCTTT | M.Sbo600657ORF2155P |
| 2160 | S | S.Sdy9764I (100% identity) | GGANNNNNNCTTT | S.Sbo600657ORF2155P |
| 2165 | 238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7140 | phosphohydrolase | |||
| 7145 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Sbo600657DcmP |
| 7150 | V | V.SsoST152DcmP (100% identity) | V.Sbo600657DcmP | |
| 7155 | drug/metabolite exporter YedA | |||
| 9020 | 79 aa hypothetical protein | |||
| 9025 | M | M.SboBSORF1263P (100% identity) | A | M.Sbo600657ORF9025P |
| 9045 | anti-adapter protein IraM | |||
| 13000 | 62 aa hypothetical protein | |||
| 13020 | M | M.Sdy9764ORFHP (100% identity) | A | M.Sbo600657ORF13020P |
| 13025 | 79 aa hypothetical protein | |||
| 13045 | RusA family crossover junction | |||
| 13050 | M | M.Sso30807ORF19320P (100% identity) | GATC | M.Sbo600657ORF13050P |
| 13055 | PerC family transcriptional regulator | |||
| 13220 | DUF1737 domain-containing protein | |||
| 13240 | M | M.Sdy9764ORFAP (94% identity) | M.Sbo600657ORF13240P | |
| 13245 | IS3-like element IS2 family transposase | |||
| 20200 | DNA-binding transcriptional regulator Fis | |||
| 20205 | M | M.Sfl714ORF2095P (100% identity) | ATGCAT | M.Sbo600657ORF20205P |
| 20210 | DUF2556 family protein | |||
| 20815 | ribulose-phosphate 3-epimerase | |||
| 20820 | M | M.UbaC1152DamP (100% identity) | GATC | M.Sbo600657DamP |
| 20825 | cell division protein DamX | |||