Escherichia coli 34.1 |
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Putative Escherichia coli 34.1 RM systems
Ref: Moffat,J. et al. unpublished
REBASE ref # 31111
| Sequence length: | GenBank #: | |
| Chromosome: | 4,696,573 bp | CP059925 |
| plasmid p1: | 123,891 bp | CP059926 |
| plasmid p2: | 122,428 bp | CP059927 |
REBASE acronym: Eco341
Org_num: 44164
All begin H5C76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15775 | transposase | |||
| 15780 | M | M.EcosH2I (99% identity) | M.Eco341ORF15780P | |
| 15785 | 98 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1575 | IS21-like element IS100 family transposase | |||
| 1580 | R | SflFF87ORF20150P (100% identity) | Eco341ORF1580P | |
| 1585 | sigma 54-interacting transcriptional regulator | |||
| 1810 | McrC family protein | |||
| 1815 | R | SflSTLE4ORF19250P (100% identity) | Eco341ORF1815P | |
| 1820 | HNH endonuclease | |||
| 3590 | recombination protein NinB | |||
| 3595 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco341ORF3595P |
| 3600 | NinE family protein | |||
| 12300 | drug/metabolite exporter YedA | |||
| 12305 | V | V.SsoSE61DcmP (100% identity) | V.Eco341DcmP | |
| 12310 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco341DcmP |
| 12315 | phosphohydrolase | |||
| 15175 | PerC family transcriptional regulator | |||
| 15180 | M | M.EcoBE311ORF6540P (100% identity) | M.Eco341ORF15180P | |
| 15185 | serine/threonine protein phosphatase | |||
| 18895 | DNA-binding transcriptional regulator Fis | |||
| 18900 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco341ORF18900P |
| 18905 | DUF2556 family protein | |||
| 19520 | ribulose-phosphate 3-epimerase | |||
| 19525 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco341DamP |
| 19530 | cell division protein DamX | |||
| plasmid p1 | ||||
| 23080 | 103 aa hypothetical protein | |||
| 23085 | M | M.Esp10290ORF5718P (99% identity) | M.Eco341ORF23085P | |
| 23090 | 73 aa hypothetical protein | |||
| plasmid p2 | ||||
| 23295 | 73 aa hypothetical protein | |||
| 23300 | M | M.EcoC0320ORF22745P (99% identity) | M.Eco341ORF23300P | |
| 23305 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | DUF4942 domain-containing protein | |||
| 1805 | R | SflSTLE4McrBP (99% identity) | Eco341McrBP | |
| 1810 | R | SflSTLE4McrCP (99% identity) | Eco341McrCP | |
| 1815 | HNH endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6470 | TraR/DksA family transcriptional regulator | |||
| 6475 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco341ORF6475P |
| 6480 | replication endonuclease | |||