Escherichia coli 56.2 |
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Putative Escherichia coli 56.2 RM systems
Ref: Moffat,J. et al. unpublished
REBASE ref # 31111
| Sequence length: | GenBank #: | |
| Chromosome: | 5,067,779 bp | CP059922 |
| plasmid p1: | 133,421 bp | CP059923 |
| plasmid p2: | 107,524 bp | CP059924 |
REBASE acronym: Eco562
Org_num: 44165
All begin H5C77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2955 | endoribonuclease SymE | |||
| 2960 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | Eco562ORF2970P |
| 2965 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.Eco562ORF2970P |
| 2970 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.Eco562ORF2970P |
| 2975 | restriction endonuclease | |||
| plasmid p1 | ||||
| 25245 | 62 aa hypothetical protein | |||
| 25250 | R | Psp3P5ORF14680P (91% identity) | Eco562ORF25255P | |
| 25255 | M | M.SenS1545ORF24780P (100% identity) | M.Eco562ORF25255P | |
| 25260 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 345 | 318 aa hypothetical protein | |||
| 350 | M | M.Ecos641ORF25P (100% identity) | M.Eco562ORF350P | |
| 355 | phage portal protein | |||
| 2770 | 59 aa hypothetical protein | |||
| 2775 | R | Ecos641ORF2855P (100% identity) | Eco562ORF2775P | |
| 2780 | HNH endonuclease | |||
| 7420 | recombination protein NinB | |||
| 7425 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco562ORF7425P |
| 7430 | NinE family protein | |||
| 13945 | drug/metabolite exporter YedA | |||
| 13950 | V | V.SsoSE61DcmP (99% identity) | V.Eco562DcmP | |
| 13955 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco562DcmP |
| 13960 | phosphohydrolase | |||
| 21415 | DNA-binding transcriptional regulator Fis | |||
| 21420 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco562ORF21420P |
| 21425 | DUF2556 family protein | |||
| 22015 | ribulose-phosphate 3-epimerase | |||
| 22020 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco562DamP |
| 22025 | cell division protein DamX | |||
| plasmid p2 | ||||
| 25470 | 103 aa hypothetical protein | |||
| 25475 | M | M.StyR64ORFAP (100% identity) | M.Eco562ORF25475P | |
| 25480 | 73 aa hypothetical protein | |||