Escherichia coli MOD1-ECOR42 |
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Putative Escherichia coli MOD1-ECOR42 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,189,763 bp
GenBank #: QOYB00000000 (NZ_QOYB00000000)
REBASE acronym: EcoR42
Org_num: 1244
All begin A6586_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13265 | 563 aa hypothetical protein | |||
| 13270 | S | S.SenGT03S1ORF2885P (88% identity) | S.EcoR42ORF13275P | |
| 13275 | M | M.Eco4705ORFGP (99% identity) | M.EcoR42ORF13275P | |
| 13280 | R | Eco266ORF19540P (99% identity) | EcoR42ORF13275P | |
| 13285 | WYL domain-containing protein | |||
| 13595 | endoribonuclease SymE | |||
| 13600 | S | S.Sen10056III (61% identity) | S.EcoR42ORF13605P | |
| 13605 | M | M.SspS13ORF3945P (100% identity) | M.EcoR42ORF13605P | |
| 13610 | R | EcoXH993ORF23720P (99% identity) | EcoR42ORF13605P | |
| 13615 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23605 | drug/metabolite exporter YedA | |||
| 23610 | V | V.EcoM121DcmP (100% identity) | V.EcoR42DcmP | |
| 23615 | M | M.SdySWHE2DcmP (99% identity) | CCWGG | M.EcoR42DcmP |
| 23620 | phosphohydrolase | |||
| 16370 | ribulose-phosphate 3-epimerase | |||
| 16375 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR42DamP |
| 16380 | cell division protein DamX | |||
| 13360 | 59 aa hypothetical protein | |||
| 13365 | R | EcoC6335ORF21785P (99% identity) | EcoR42ORF13365P | |
| 13370 | HNH endonuclease | |||
| 6055 | recombination protein NinB | |||
| 6060 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoR42ORF6060P |
| 6065 | NinE family protein | |||
| 23165 | 73 aa hypothetical protein | |||
| 23170 | M | M.Sen527ORF25750P (100% identity) | M.EcoR42ORF23170P | |
| 23175 | 98 aa hypothetical protein | |||
| 22690 | recombination-associated protein RdgC | |||
| 22695 | M | M.EcoD6117ORF70P (99% identity) | M.EcoR42ORF22695P | |
| 22710 | 120 aa hypothetical protein | |||
| 3170 | Fis family transcriptional regulator | |||
| 3175 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.EcoR42ORF3175P |
| 3180 | DUF2556 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13585 | DUF1127 domain-containing protein | |||
| 13590 | R | Eco11111GmrSDP (99% identity) | EcoR42GmrSDP | |
| 13595 | endoribonuclease SymE | |||