Escherichia coli MOD1-ECOR23 |
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Putative Escherichia coli MOD1-ECOR23 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,093,876 bp
GenBank #: QOXI00000000 (NZ_QOXI00000000)
REBASE acronym: EcoR23
Org_num: 1240
All begin APT24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21005 | endoribonuclease SymE | |||
| 21010 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoR23I |
| 21015 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.EcoR23IP |
| 21020 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoR23IP |
| 21025 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24340 | 81 aa hypothetical protein | |||
| 24345 | M | M.EcosS3ORF15775P (100% identity) | M.EcoR23ORF24345P | |
| 24350 | R | EcosS3ORF15775P (100% identity) | EcoR23ORF24345P | |
| 24355 | 527 aa hypothetical protein | |||
| 22645 | integrase | |||
| 22650 | M | M1.EcoR60ORF15915P (100% identity) | M1.EcoR23ORF22650P | |
| 22655 | M | M2.EcoR60ORF15915P (100% identity) | M2.EcoR23ORF22650P | |
| 22660 | HNH endonuclease | |||
| 22655 | DNA cytosine methyltransferase | |||
| 22660 | R | EcoR60ORF15925P (100% identity) | EcoR23ORF22660P | |
| 22665 | transposase | |||
| 21250 | PerC family transcriptional regulator | |||
| 21255 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoR23ORF21255P |
| 21260 | LexA family transcriptional regulator | |||
| 3115 | phosphohydrolase | |||
| 3120 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoR23DcmP |
| 3125 | V | V.EcosC25DcmP (100% identity) | V.EcoR23DcmP | |
| 3130 | drug/metabolite exporter YedA | |||
| 15630 | cell division protein DamX | |||
| 15635 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR23DamP |
| 15640 | ribulose-phosphate 3-epimerase | |||
| 9000 | Fis family transcriptional regulator | |||
| 9005 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoR23ORF9005P |
| 9010 | DUF2556 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24460 | DUF4102 domain-containing protein | |||
| 24465 | R | EcoUTI89IP (100% identity) | CACAG | EcoR23ORF24470P |
| 24470 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoR23ORF24470P |
| 24475 | 52 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18670 | recombination protein NinB | |||
| 18675 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoR23ORF18675P |
| 18680 | NinE family protein | |||