Escherichia coli MOD1-ECOR11 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MOD1-ECOR11 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,182,586 bp
GenBank #: QOWW00000000 (NZ_QOWW00000000)
REBASE acronym: EcoR11
Org_num: 1234
All begin APT12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3790 | restriction endonuclease | |||
| 3795 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoR11I |
| 3800 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoR11I |
| ??? | S | S.EcoU90ORF3805P (100% identity) | TGANNNNNNNNTGCT | S.EcoR11I |
| 3810 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25055 | 102 aa hypothetical protein | |||
| 25060 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoR11ORF25060P |
| 25065 | 73 aa hypothetical protein | |||
| 10675 | phosphohydrolase | |||
| 10680 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoR11DcmP |
| 10685 | V | V.SsoSE61DcmP (100% identity) | V.EcoR11DcmP | |
| 10690 | drug/metabolite exporter YedA | |||
| 24015 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoR11ORF24020P | |
| 24025 | 59 aa hypothetical protein | |||
| 24165 | BREX-1 system phosphatase PglZ type A | |||
| 24170 | RM | Eco9010II (100% identity) | GGTAAG | EcoR11ORF24170P |
| 24175 | BREX system P-loop protein BrxC | |||
| 13890 | DUF2556 domain-containing protein | |||
| 13895 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoR11ORF13895P |
| 13900 | Fis family transcriptional regulator | |||
| 20615 | recombination protein NinB | |||
| 20620 | M | M.EcoJA37ORFFP (94% identity) | GATC | M.EcoR11ORF20620P |
| 20625 | NinE family protein | |||
| 12800 | protein DamX | |||
| 12805 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoR11DamP |
| 12810 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3785 | GTPase | |||
| 3790 | R | Ssp28760MrrP (100% identity) | EcoR11MrrP | |
| 3795 | type I restriction-modification system | |||
| 3810 | endoribonuclease SymE | |||
| 3815 | R | Eco9010McrBP (100% identity) | EcoR11McrBP | |
| 3820 | R | Ssp28760McrCP (99% identity) | EcoR11McrCP | |