Escherichia coli MOD1-ECOR5 |
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Putative Escherichia coli MOD1-ECOR5 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,065,618 bp
GenBank #: QOWQ00000000 (NZ_QOWQ00000000)
REBASE acronym: EcoR5
Org_num: 1245
All begin APT06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24245 | transcription factor | |||
| 24250 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoR5ORF24250P |
| 24255 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.EcoR5ORF24250P |
| 24260 | DUF4433 domain-containing protein | |||
| 24265 | Appr-1-p processing protein | |||
| 24270 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | EcoR5ORF24250P |
| 24275 | M48 family peptidase | |||
| 11235 | restriction endonuclease | |||
| 11240 | R | Eco42C22ORF11485P (99% identity) | EcoR5ORF11245P | |
| 11245 | M | M.Eco34C21ORF2660P (99% identity) | M.EcoR5ORF11245P | |
| 11250 | S | S.KmiLDS17ORF5840P (81% identity) | S.EcoR5ORF11245P | |
| 11255 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25690 | M | M.Eco1385ORF11650P (88% identity) | M.EcoR5ORF25690P | |
| 25710 | 72 aa hypothetical protein | |||
| 24980 | 73 aa hypothetical protein | |||
| 25000 | M | M.Spn7978ORF3515P (88% identity) | M.EcoR5ORF25000P | |
| 8795 | DUF2556 domain-containing protein | |||
| 8800 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoR5ORF8800P |
| 8805 | Fis family transcriptional regulator | |||
| 7445 | ribulose-phosphate 3-epimerase | |||
| 7450 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoR5DamP |
| 7455 | protein DamX | |||
| 15800 | 75 aa hypothetical protein | |||
| 15805 | M | M.EcoO81Dam2P (100% identity) | M.EcoR5ORF15805P | |
| 15810 | 78 aa hypothetical protein | |||
| 6925 | phosphohydrolase | |||
| 6930 | M | M.EcoLR291DcmP (100% identity) | CCWGG | M.EcoR5DcmP |
| 6935 | V | V.EcoS004DcmP (100% identity) | V.EcoR5DcmP | |
| 6940 | EamA family transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11230 | GTPase | |||
| 11235 | R | Ssp28760MrrP (99% identity) | EcoR5MrrP | |
| 11240 | type I restriction-modification system | |||
| 11255 | endoribonuclease SymE | |||
| ??? | R | EcoVCSW5GmrSDP (98% identity) | EcoR5GmrSDP | |
| 11270 | DUF1127 domain-containing protein | |||