Escherichia coli 58-3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 58-3 RM systems
Ref: Lv,H. and Cui,Q. unpublished
REBASE ref # 31044
Complete sequence: 4,688,561 bp
GenBank #: CP050036
REBASE acronym: Eco583
Org_num: 43896
All begin G9P49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19440 | DUF4942 domain-containing protein | |||
| 19445 | M | M.Eco336ORF19485AP (100% identity) | M.Eco583ORF19445AP | |
| 19450 | IS3 family transposase | |||
| 19455 | M | M.Eco336ORF19485BP (100% identity) | M.Eco583ORF19445BP | |
| 19460 | IS1 family transposase | |||
| 19465 | S | S.Eco336ORF19485P (100% identity) | S.Eco583ORF19445P | |
| 19470 | R | Eco336ORF19485P (100% identity) | Eco583ORF19445P | |
| 19475 | restriction endonuclease | |||
| 19570 | WYL domain-containing protein | |||
| 19575 | R | Eco336ORF19620P (99% identity) | Eco583ORF19580P | |
| 19580 | M | M.Eco336ORF19620P (100% identity) | M.Eco583ORF19580P | |
| ??? | S | S.Eco336ORF19620P (100% identity) | S.Eco583ORF19580P | |
| 19590 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | cell division protein DamX | |||
| 1685 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco583DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 5485 | TraR/DksA family transcriptional regulator | |||
| 5490 | M | M.Ecos4422ORF14175P (100% identity) | GATC | M.Eco583ORF5490P |
| 5495 | replication endonuclease | |||
| 9020 | phosphohydrolase | |||
| 9025 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco583DcmP |
| 9030 | V | V.SsoSE61DcmP (100% identity) | V.Eco583DcmP | |
| 9035 | drug/metabolite exporter YedA | |||
| 19415 | HNH endonuclease | |||
| 19420 | R | SflFF17ORF19275P (100% identity) | Eco583ORF19420P | |
| 19425 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19420 | HNH endonuclease | |||
| 19425 | R | EcoYPE3McrCP (100% identity) | Eco583McrCP | |
| 19430 | R | EcoYPE3McrBP (100% identity) | Eco583McrBP | |
| 19435 | IS3 family transposase | |||