Escherichia coli RHB08-C20 |
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Putative Escherichia coli RHB08-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,212,720 bp | CP055971 |
| plasmid pRHB08-C20_2: | 128,127 bp | CP055972 |
REBASE acronym: Eco08C20
Org_num: 43629
All begin HVW22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3530 | DUF262 domain-containing protein | |||
| 3535 | R | Ecos3057ORF9770P (100% identity) | Eco08C20ORF3540P | |
| 3540 | M | M.SspS13ORF3945P (100% identity) | M.Eco08C20ORF3540P | |
| 3545 | S | S.Eco42405ORF21135P (100% identity) | S.Eco08C20ORF3540P | |
| 3550 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3765 | RM | Eco42405ORF21370P (100% identity) | Eco08C20ORF3765P | |
| 3770 | DEAD/DEAH box helicase | |||
| 3810 | HNH endonuclease | |||
| 3815 | R | Eco42405ORF21420P (100% identity) | Eco08C20ORF3815P | |
| 3820 | 59 aa hypothetical protein | |||
| 5145 | 63 aa hypothetical protein | |||
| 5150 | M | M.Eco9078ORF5116P (100% identity) | M.Eco08C20ORF5150P | |
| 5155 | TrmB family transcriptional regulator | |||
| 5185 | LexA family transcriptional regulator | |||
| 5190 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco08C20ORF5190P |
| 5195 | PerC family transcriptional regulator | |||
| 7695 | IS3 family transposase | |||
| 7700 | R | EcoTL14DptFP (100% identity) | Eco08C20DptFP | |
| 7705 | DNA phosphorothioation-dependent restriction | |||
| 7700 | DNA phosphorothioation-dependent restriction | |||
| 7705 | R | EcoTL14DptGP (100% identity) | Eco08C20DptGP | |
| 7705 | DNA phosphorothioation-dependent restriction | |||
| 7710 | R | Eco08C16DptHP (100% identity) | Eco08C20DptHP | |
| 7715 | DUF262 domain-containing protein | |||
| 7720 | AAA family ATPase | |||
| 7725 | M | M.SenS530DndEP (100% identity) | M.Eco08C20DndEP | |
| 7730 | DNA sulfur modification protein DndD | |||
| 7725 | DNA sulfur modification protein DndE | |||
| 7730 | M | M.EcoTL14DndDP (100% identity) | M.Eco08C20DndDP | |
| 7735 | DNA phosphorothioation system sulfurtransferase | |||
| 7730 | DNA sulfur modification protein DndD | |||
| 7735 | M | M.EcoTL14DndCP (100% identity) | M.Eco08C20DndCP | |
| 7740 | DNA sulfur modification protein DndB | |||
| 7735 | DNA phosphorothioation system sulfurtransferase | |||
| 7740 | M | M.EcoTL14DndBP (100% identity) | M.Eco08C20DndBP | |
| 7745 | porin family protein | |||
| 9330 | cell division protein DamX | |||
| 9335 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco08C20DamP |
| 9340 | ribulose-phosphate 3-epimerase | |||
| 9860 | DUF2556 family protein | |||
| 9865 | M | M.Eco42405ORF2830P (100% identity) | ATGCAT | M.Eco08C20ORF9865P |
| 9870 | DNA-binding transcriptional regulator Fis | |||
| 17055 | phosphohydrolase | |||
| 17060 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.Eco08C20DcmP |
| 17065 | V | V.EcosEC71DcmP (100% identity) | V.Eco08C20DcmP | |
| 17070 | drug/metabolite exporter YedA | |||
| 21780 | TrmB family transcriptional regulator | |||
| 21785 | M | M.Eco1B2ORF10215P (100% identity) | M.Eco08C20ORF21785P | |
| 21795 | holin | |||
| plasmid pRHB08-C20_2 | ||||
| 25310 | 73 aa hypothetical protein | |||
| 25315 | M | M.EcoC9121ORF217P (100% identity) | M.Eco08C20ORF25315P | |
| 25320 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20755 | DUF2732 family protein | |||
| 20760 | M | M.EcoFec101ORF21155P (100% identity) | M.Eco08C20ORF20760P | |
| 20765 | 66 aa hypothetical protein | |||