Escherichia coli RHB20-C09 |
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Putative Escherichia coli RHB20-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,372,400 bp | CP055951 |
| plasmid pRHB20-C09_3: | 93,238 bp | CP055953 |
REBASE acronym: Eco20C09
Org_num: 43633
All begin HVX60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12380 | 128 aa hypothetical protein | |||
| 12385 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco20C09ORF12385P |
| 12390 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco20C09ORF12385P |
| 12395 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 55 | phosphohydrolase | |||
| 60 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco20C09DcmP |
| 65 | V | V.SflFF64DcmP (100% identity) | V.Eco20C09DcmP | |
| 70 | drug/metabolite exporter YedA | |||
| 6935 | replication endonuclease | |||
| 6940 | M | M.EcoTO6ORF3189P (99% identity) | GATC | M.Eco20C09ORF6940P |
| 6945 | TraR/DksA family transcriptional regulator | |||
| 8780 | DUF1317 family protein | |||
| 8785 | M | M.Sbo812ORFAP (100% identity) | M.Eco20C09ORF8785P | |
| 8790 | cell division protein ZapA | |||
| 11935 | RusA family crossover junction | |||
| 11940 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.Eco20C09ORF11940P |
| 11945 | 330 aa hypothetical protein | |||
| 12360 | HNH endonuclease | |||
| 12365 | R | EcoJ103ORFCP (96% identity) | Eco20C09ORF12365P | |
| 12370 | AAA family ATPase | |||
| 14070 | LexA family transcriptional regulator | |||
| 14075 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco20C09ORF14075P |
| 14080 | 330 aa hypothetical protein | |||
| 17650 | cell division protein DamX | |||
| 17655 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco20C09DamP |
| 17660 | ribulose-phosphate 3-epimerase | |||
| 18205 | DUF2556 family protein | |||
| 18210 | M | M.Ecod6c8ORFAP (100% identity) | ATGCAT | M.Eco20C09ORF18210P |
| 18215 | DNA-binding transcriptional regulator Fis | |||
| 23530 | recombination protein NinB | |||
| 23535 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco20C09ORF23535P |
| 23540 | NinE family protein | |||
| 25325 | recombination protein NinB | |||
| 25330 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco20C09ORF25330P |
| 25335 | NinE family protein | |||
| 26670 | TrmB family transcriptional regulator | |||
| 26675 | M | M.EcoSO63ORF26225P (100% identity) | M.Eco20C09ORF26675P | |
| 26680 | anti-adapter protein IraM | |||
| plasmid pRHB20-C09_3 | ||||
| 27705 | 216 aa hypothetical protein | |||
| 27710 | M | M.EcoW26ORF47590P (100% identity) | M.Eco20C09ORF27710P | |
| 27715 | glutamine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12365 | HNH endonuclease | |||
| 12370 | R | SflN101McrBP (100% identity) | Eco20C09McrBP | |
| 12375 | R | EcohubtMcrCP (100% identity) | Eco20C09McrCP | |
| 12380 | 128 aa hypothetical protein | |||