Escherichia coli RHB30-C20 |
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Putative Escherichia coli RHB30-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,935,440 bp | CP055945 |
| plasmid pRHB30-C20_2: | 196,445 bp | CP055946 |
| plasmid pRHB30-C20_3: | 85,551 bp | CP055947 |
REBASE acronym: Eco30C20
Org_num: 43634
All begin HVY81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8605 | IS1-like element IS1A family transposase | |||
| 8610 | S | S.SflSTLE3ORF19325P (55% identity) | S.Eco30C20ORF8615P | |
| 8615 | M | M.SflSTLE3ORF19325P (100% identity) | M.Eco30C20ORF8615P | |
| 8620 | restriction endonuclease | |||
| plasmid pRHB30-C20_3 | ||||
| 25530 | type II toxin-antitoxin system Phd/YefM family | |||
| 25535 | M | M.Eco30C19ORF25495P (100% identity) | M.Eco30C20ORF25535P | |
| 25540 | S | S.Eco30C19ORF25495P (100% identity) | S.Eco30C20ORF25535P | |
| 25545 | R | Eco30C19ORF25495P (100% identity) | Eco30C20ORF25535P | |
| 25550 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 2325 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco30C20ORF2325P |
| 2330 | DUF2556 family protein | |||
| 2945 | ribulose-phosphate 3-epimerase | |||
| 2950 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco30C20DamP |
| 2955 | cell division protein DamX | |||
| 5675 | replication endonuclease | |||
| 5680 | M | M.EcoDEC13DORF4454P (100% identity) | M.Eco30C20ORF5680P | |
| 5685 | 329 aa hypothetical protein | |||
| 19125 | drug/metabolite exporter YedA | |||
| 19130 | V | V.SflFF64DcmP (100% identity) | V.Eco30C20DcmP | |
| 19135 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco30C20DcmP |
| 19140 | phosphohydrolase | |||
| 20870 | 401 aa hypothetical protein | |||
| 20875 | M | M.Eco30C19ORF15225P (100% identity) | M.Eco30C20ORF20875P | |
| 20880 | holin | |||
| 22170 | PerC family transcriptional regulator | |||
| 22175 | M | M.EfeC18ORF5895P (100% identity) | M.Eco30C20ORF22175P | |
| 22180 | DUF1382 family protein | |||
| 22760 | 121 aa hypothetical protein | |||
| 22765 | R | Sso8033ORF3755P (100% identity) | Eco30C20ORF22770P | |
| 22770 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco30C20ORF22770P | |
| 22775 | 257 aa hypothetical protein | |||
| plasmid pRHB30-C20_2 | ||||
| 25175 | DNA-binding protein | |||
| 25180 | M | M.SenBL10ORFDP (100% identity) | M.Eco30C20ORF25180P | |
| 25185 | 284 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12815 | recombination protein NinB | |||
| 12820 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco30C20ORF12820P |
| 12825 | NinE family protein | |||