Escherichia fergusonii RHB02-C22 |
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Putative Escherichia fergusonii RHB02-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,727,820 bp | CP058057 |
| plasmid pRHB02-C22_2: | 116,881 bp | CP058058 |
| plasmid pRHB02-C22_3: | 94,718 bp | CP058059 |
REBASE acronym: Efe02C22
Org_num: 43480
All begin HVV54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18410 | Fic family protein | |||
| 18415 | R | EfeC18ORF18420P (100% identity) | Efe02C22ORF18420P | |
| 18420 | M | M.EfeC18ORF18420P (100% identity) | M.Efe02C22ORF18420P | |
| 18425 | S | S.EfeC18ORF18420P (100% identity) | S.Efe02C22ORF18420P | |
| 18430 | endoribonuclease SymE | |||
| plasmid pRHB02-C22_3 | ||||
| 23520 | 3-phosphatase | |||
| 23525 | R | EfeC18ORF22895P (100% identity) | Efe02C22ORF23535P | |
| 23530 | S | S.EfeC18ORF22895P (100% identity) | S.Efe02C22ORF23535P | |
| 23535 | M | M.EfeC18ORF22895P (100% identity) | M.Efe02C22ORF23535P | |
| 23540 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 675 | bifunctional isocitrate dehydrogenase | |||
| 680 | M | M.EfeC18ORF680P (100% identity) | M.Efe02C22ORF680P | |
| 685 | glyoxylate bypass operon transcriptional | |||
| 5890 | DUF1382 family protein | |||
| 5895 | M | M.EfeC18ORF5895P (100% identity) | M.Efe02C22ORF5895P | |
| 5900 | PerC family transcriptional regulator | |||
| 7695 | TraR/DksA family transcriptional regulator | |||
| 7700 | M | M.EfeC18ORF7705P (100% identity) | M.Efe02C22ORF7700P | |
| 7705 | 273 aa hypothetical protein | |||
| 19200 | DNA-binding transcriptional regulator Fis | |||
| 19205 | M | M.EfeC18ORF19205P (100% identity) | M.Efe02C22ORF19205P | |
| 19210 | DUF2556 family protein | |||
| 19725 | ribulose-phosphate 3-epimerase | |||
| 19730 | M | M.EfeTDamP (100% identity) | M.Efe02C22DamP | |
| 19735 | cell division protein DamX | |||
| plasmid pRHB02-C22_2 | ||||
| 22975 | 104 aa hypothetical protein | |||
| 22980 | M | M.SspPIBORF23080P (100% identity) | M.Efe02C22ORF22980P | |
| 22985 | 73 aa hypothetical protein | |||
| plasmid pRHB02-C22_3 | ||||
| 23410 | recombination-associated protein RdgC | |||
| 23415 | M | M.EfeC18ORF23015P (100% identity) | M.Efe02C22ORF23415P | |
| 23430 | tellurite/colicin resistance protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18430 | endoribonuclease SymE | |||
| 18435 | R | EfeTMcrBP (100% identity) | Efe02C22McrBP | |
| 18440 | R | EfeMcrCP (100% identity) | Efe02C22McrCP | |