Escherichia coli RHB11-C16 |
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Putative Escherichia coli RHB11-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,987,156 bp | CP057885 |
| plasmid pRHB11-C16_2: | 104,067 bp | CP057886 |
REBASE acronym: Eco11C16
Org_num: 43470
All begin HVW56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21655 | DUF4935 domain-containing protein | |||
| 21660 | S | S.EcoC5ORF26620P (100% identity) | S.Eco11C16ORF21665P | |
| 21665 | M | M.Ecos641ORF2625P (99% identity) | M.Eco11C16ORF21665P | |
| 21670 | R | Eco21C02ORF4225P (99% identity) | Eco11C16ORF21665P | |
| 21675 | DUF600 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11C16DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Eco11C16ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 8070 | TrmB family transcriptional regulator | |||
| 8075 | M | M.EcoRG044ORF14035P (98% identity) | M.Eco11C16ORF8075P | |
| 8085 | holin | |||
| 9270 | phosphohydrolase | |||
| 9275 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco11C16DcmP |
| 9280 | V | V.SsoSE61DcmP (100% identity) | V.Eco11C16DcmP | |
| 9285 | drug/metabolite exporter YedA | |||
| 17620 | DUF1317 family protein | |||
| 17625 | M | M.Sbo812ORFAP (100% identity) | M.Eco11C16ORF17625P | |
| 17630 | cell division protein ZapA | |||
| 20840 | HNH endonuclease | |||
| 20845 | R | EcosB2CORFAP (100% identity) | Eco11C16ORF20845P | |
| 20850 | 100 aa hypothetical protein | |||
| 21635 | IS481 family transposase | |||
| 21640 | R | Eco747ORF23885P (83% identity) | Eco11C16ORF21640P | |
| 21645 | 5-nucleotidase | |||
| plasmid pRHB11-C16_2 | ||||
| 24560 | 73 aa hypothetical protein | |||
| 24565 | M | M.SflN92ORF24820P (99% identity) | M.Eco11C16ORF24565P | |
| 24570 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20850 | 100 aa hypothetical protein | |||
| 20855 | R | EcoXJ51ORF19525P (99% identity) | GAGCC | Eco11C16ORF20860P |
| 20860 | M | M.EcoM8ORF4405P (100% identity) | GAGCC | M.Eco11C16ORF20860P |
| 20865 | DEAD/DEAH box helicase family protein | |||