Escherichia coli RHB11-C17 |
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Putative Escherichia coli RHB11-C17 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,802,990 bp | CP057882 |
| plasmid pRHB11-C17_2: | 107,065 bp | CP057883 |
REBASE acronym: Eco11C17
Org_num: 43471
All begin HVW57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2745 | endoribonuclease SymE | |||
| 2750 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco11C17ORF2755P |
| 2755 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco11C17ORF2755P |
| 2760 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco11C17ORF2755P |
| 2765 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | 142 aa hypothetical protein | |||
| 2150 | R | Tod27ORFAP (100% identity) | Eco11C17ORF2155P | |
| 2155 | M | M.KcoCa90ORF22520P (99% identity) | M.Eco11C17ORF2155P | |
| 2160 | site-specific integrase | |||
| 7280 | TraR/DksA family transcriptional regulator | |||
| 7285 | M | M.EcoTO6ORF3189P (97% identity) | GATC | M.Eco11C17ORF7285P |
| 7290 | replication endonuclease | |||
| 13055 | drug/metabolite exporter YedA | |||
| 13060 | V | V.SflFF64DcmP (100% identity) | V.Eco11C17DcmP | |
| 13065 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11C17DcmP |
| 13070 | phosphohydrolase | |||
| 19510 | DNA-binding transcriptional regulator Fis | |||
| 19515 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.Eco11C17ORF19515P |
| 19520 | DUF2556 family protein | |||
| 20065 | ribulose-phosphate 3-epimerase | |||
| 20070 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11C17DamP |
| 20075 | cell division protein DamX | |||
| plasmid pRHB11-C17_2 | ||||
| 23310 | 59 aa hypothetical protein | |||
| 23315 | M | M.Ecoww7ORF24400P (99% identity) | M.Eco11C17ORF23315P | |
| 23320 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2730 | DUF1127 domain-containing protein | |||
| 2735 | R | SflN101GmrSP (99% identity) | Eco11C17GmrSP | |
| ??? | R | EcoW122GmrDP (100% identity) | Eco11C17GmrDP | |
| 2745 | endoribonuclease SymE | |||