Escherichia coli RHB11-C23 |
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Putative Escherichia coli RHB11-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,217,899 bp | CP057879 |
| plasmid pRHB11-C23_2: | 112,865 bp | CP057880 |
REBASE acronym: Eco11C23
Org_num: 43472
All begin HVW58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4480 | DUF600 family protein | |||
| 4485 | R | Eco21C02ORF4225P (100% identity) | Eco11C23ORF4490P | |
| 4490 | M | M.Eco21C02ORF4225P (100% identity) | M.Eco11C23ORF4490P | |
| 4495 | S | S.Eco8SOC05ORF4105P (98% identity) | S.Eco11C23ORF4490P | |
| 4500 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1910 | cell division protein DamX | |||
| 1915 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11C23DamP |
| 1920 | ribulose-phosphate 3-epimerase | |||
| 2440 | DUF2556 family protein | |||
| 2445 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco11C23ORF2445P |
| 2450 | DNA-binding transcriptional regulator Fis | |||
| 4910 | N-6 DNA methylase | |||
| 4915 | M | M.Sen523ORF9345P (100% identity) | M.Eco11C23ORF4915P | |
| 4920 | 130 aa hypothetical protein | |||
| 10035 | phosphohydrolase | |||
| 10040 | M | M.Eco26C21DcmP (100% identity) | CCWGG | M.Eco11C23DcmP |
| 10045 | V | V.Eco11C15DcmP (100% identity) | V.Eco11C23DcmP | |
| 10050 | drug/metabolite exporter YedA | |||
| 12080 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco11C23ORF12085P | |
| 12090 | 60 aa hypothetical protein | |||
| 19715 | helix-turn-helix transcriptional regulator | |||
| 19720 | R | EcoC9965DptFP (100% identity) | Eco11C23DptFP | |
| 19725 | DNA phosphorothioation-dependent restriction | |||
| 19720 | DNA phosphorothioation-dependent restriction | |||
| 19725 | R | SflFF24DptGP (100% identity) | Eco11C23DptGP | |
| 19725 | DNA phosphorothioation-dependent restriction | |||
| 19730 | R | Eco26C21DptHP (100% identity) | Eco11C23DptHP | |
| 19735 | 367 aa hypothetical protein | |||
| 19740 | 318 aa hypothetical protein | |||
| 19745 | M | M.Eco26C21DndEP (100% identity) | M.Eco11C23DndEP | |
| 19750 | DNA sulfur modification protein DndD | |||
| 19745 | DNA sulfur modification protein DndE | |||
| 19750 | M | M.Eco26C21DndDP (100% identity) | M.Eco11C23DndDP | |
| 19755 | DNA phosphorothioation system sulfurtransferase | |||
| 19750 | DNA sulfur modification protein DndD | |||
| 19755 | M | M.EcoC9965DndCP (100% identity) | M.Eco11C23DndCP | |
| 19760 | DNA sulfur modification protein DndB | |||
| 19755 | DNA phosphorothioation system sulfurtransferase | |||
| 19760 | M | M.EcoC9965DndBP (100% identity) | M.Eco11C23DndBP | |
| 19765 | integrase domain-containing protein | |||
| 21750 | RM | Eco26C21ORF21240P (100% identity) | Eco11C23ORF21750P | |
| 21755 | DEAD/DEAH box helicase | |||
| 21785 | N-acetylneuraminic acid mutarotase | |||
| 21790 | R | Eco26C21ORF21280P (100% identity) | Eco11C23ORF21790P | |
| 21795 | 59 aa hypothetical protein | |||
| plasmid pRHB11-C23_2 | ||||
| 25260 | 73 aa hypothetical protein | |||
| 25265 | M | M.SflN92ORF24820P (100% identity) | M.Eco11C23ORF25265P | |
| 25270 | 101 aa hypothetical protein | |||