Escherichia coli RHB12-C02 |
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Putative Escherichia coli RHB12-C02 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,751,208 bp | CP057873 |
| plasmid pRHB12-C02_2: | 105,119 bp | CP057874 |
| plasmid pRHB12-C02_3: | 94,097 bp | CP057875 |
REBASE acronym: Eco12C02
Org_num: 43475
All begin HVW61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17890 | endoribonuclease SymE | |||
| 17895 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco12C02ORF17900P |
| 17900 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco12C02ORF17900P |
| 17905 | R | EcoN61ORF38010P (100% identity) | AACNNNNNNGTGC | Eco12C02ORF17900P |
| 17910 | adenine/cytosine-specific restriction | |||
| plasmid pRHB12-C02_3 | ||||
| 23540 | type II toxin-antitoxin system Phd/YefM family | |||
| 23545 | M | M.Eco056ORF25145P (100% identity) | M.Eco12C02ORF23545P | |
| 23550 | S | S.Eco056ORF25145P (100% identity) | S.Eco12C02ORF23545P | |
| 23555 | anticodon nuclease | |||
| 23560 | R | Eco17C14ORF20570P (100% identity) | Eco12C02ORF23545P | |
| 23565 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1355 | DUF977 family protein | |||
| 1360 | M | M.Eco26C20ORF5535P (100% identity) | M.Eco12C02ORF1360P | |
| 1365 | R | EcosEC21ORF11865P (100% identity) | Eco12C02ORF1360P | |
| 1370 | DUF1367 family protein | |||
| 1645 | transcriptional regulator | |||
| 1650 | M | M.Eco311ORF11850P (100% identity) | GATC | M.Eco12C02ORF1650P |
| 1655 | LexA family transcriptional regulator | |||
| 5835 | drug/metabolite exporter YedA | |||
| 5840 | V | V.EcoSCU109DcmP (100% identity) | V.Eco12C02DcmP | |
| 5845 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco12C02DcmP |
| 5850 | phosphohydrolase | |||
| 12320 | DNA-binding transcriptional regulator Fis | |||
| 12325 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco12C02ORF12325P |
| 12330 | DUF2556 family protein | |||
| 12945 | ribulose-phosphate 3-epimerase | |||
| 12950 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco12C02DamP |
| 12955 | cell division protein DamX | |||
| 22195 | TraR/DksA family transcriptional regulator | |||
| 22200 | M | M.KpnRKPORF17480P (99% identity) | GATC | M.Eco12C02ORF22200P |
| 22205 | replication endonuclease | |||
| plasmid pRHB12-C02_2 | ||||
| 23105 | 73 aa hypothetical protein | |||
| 23110 | M | M.SflN92ORF24820P (100% identity) | M.Eco12C02ORF23110P | |
| 23115 | 101 aa hypothetical protein | |||
| plasmid pRHB12-C02_3 | ||||
| 23660 | tellurite/colicin resistance protein | |||
| 23675 | M | M.EfeD053ORF22855P (100% identity) | M.Eco12C02ORF23675P | |
| 23680 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17880 | R | SenHNK130McrCP (100% identity) | Eco12C02McrCP | |
| 17885 | R | SenHNK130McrBP (100% identity) | Eco12C02McrBP | |
| 17890 | endoribonuclease SymE | |||
| 17905 | type I restriction-modification system | |||
| 17910 | R | SenHNK130MrrP (100% identity) | Eco12C02MrrP | |
| 17915 | GTPase | |||