Escherichia coli RHB12-C24 |
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Putative Escherichia coli RHB12-C24 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,616,178 bp
GenBank #: CP057860
REBASE acronym: Eco12C24
Org_num: 43478
All begin HVW71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19455 | IS1 family transposase | |||
| 19460 | R | Ror24150ORF17255P (100% identity) | GGANNNNNCTC | Eco12C24ORF19470P |
| 19465 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco12C24ORF19470P |
| 19470 | M | M.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | M.Eco12C24ORF19470P |
| 19475 | ParB N-terminal domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 620 | phosphohydrolase | |||
| 625 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco12C24DcmP |
| 630 | V | V.EcosEC7DcmP (100% identity) | V.Eco12C24DcmP | |
| 635 | drug/metabolite exporter YedA | |||
| 15810 | cell division protein DamX | |||
| 15815 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12C24DamP |
| 15820 | ribulose-phosphate 3-epimerase | |||
| 16435 | DUF2556 family protein | |||
| 16440 | M | M.EcoC0320ORF2480P (100% identity) | ATGCAT | M.Eco12C24ORF16440P |
| 16445 | DNA-binding transcriptional regulator Fis | |||
| 20795 | dcm methylase | |||
| 20800 | M | M.KpnsK8ORF20020P (99% identity) | M.Eco12C24ORF20800P | |
| 20805 | regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9225 | DUF4113 domain-containing protein | |||
| 9230 | R | EcoET654GmrSDP (100% identity) | Eco12C24GmrSDP | |
| 9235 | recombinase family protein | |||