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Putative Escherichia coli RHB13-C01 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,859,593 bp | CP057854 |
plasmid pRHB13-C01_3: | 95,217 bp | CP057856 |
plasmid pRHB13-C01_4: | 91,421 bp | CP057857 |
REBASE acronym: Eco13C01
Org_num: 43337
All begin HVW72_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10730 | NADPH-dependent aldehyde reductase Ahr | |||
10740 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco13C01ORF10750P |
10745 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco13C01ORF10750P |
10750 | M | M.Eco13SOC03ORF10840P (100% identity) | RTCANNNNNNCTC | M.Eco13C01ORF10750P |
10755 | restriction endonuclease subunit M | |||
18390 | IS5-like element ISKpn26 family transposase | |||
18395 | R | Eco13SOC03ORF18540P (100% identity) | Eco13C01ORF18405P | |
18400 | S | S.SflN97ORF14060P (100% identity) | S.Eco13C01ORF18405P | |
18405 | M | M.SflN97ORF14060P (100% identity) | M.Eco13C01ORF18405P | |
18410 | GTPase family protein | |||
plasmid pRHB13-C01_3 | ||||
24375 | type II toxin-antitoxin system Phd/YefM family | |||
24380 | M | M.EcoS321ORF25465P (100% identity) | M.Eco13C01ORF24380P | |
24385 | S | S.EcoMB50ORF22700P (100% identity) | S.Eco13C01ORF24380P | |
24390 | R | EcoS321ORF25465P (100% identity) | Eco13C01ORF24380P | |
24395 | 3-phosphatase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
735 | phosphohydrolase | |||
740 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco13C01DcmP |
745 | V | V.SsoSE61DcmP (100% identity) | V.Eco13C01DcmP | |
750 | drug/metabolite exporter YedA | |||
5530 | phage lysis protein EssD | |||
5535 | M | M.Sso63633ORF22290P (100% identity) | M.Eco13C01ORF5535P | |
5540 | 67 aa hypothetical protein | |||
5570 | LexA family transcriptional regulator | |||
5575 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco13C01ORF5575P |
5580 | PerC family transcriptional regulator | |||
8725 | NinE family protein | |||
8730 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco13C01ORF8730P |
8735 | recombination protein NinB | |||
8830 | DUF1317 family protein | |||
8835 | M | M.Sbo812ORFAP (100% identity) | M.Eco13C01ORF8835P | |
8840 | 93 aa hypothetical protein | |||
10770 | McrC family protein | |||
10775 | R | EcoWCTORF19980P (100% identity) | Eco13C01ORF10775P | |
10780 | HNH endonuclease | |||
16705 | cell division protein DamX | |||
16710 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13C01DamP |
16715 | ribulose-phosphate 3-epimerase | |||
17260 | DUF2556 family protein | |||
17265 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco13C01ORF17265P |
17270 | DNA-binding transcriptional regulator Fis | |||
plasmid pRHB13-C01_3 | ||||
24485 | SPFH/Band 7/PHB domain protein | |||
24500 | M | M.Sen9860ORF25540P (100% identity) | M.Eco13C01ORF24500P | |
24505 | recombination-associated protein RdgC | |||
plasmid pRHB13-C01_4 | ||||
24640 | 103 aa hypothetical protein | |||
24645 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco13C01ORF24645P |
24650 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10760 | IS3-like element IS3 family transposase | |||
10765 | R | SflSTLE4McrBP (100% identity) | Eco13C01McrBP | |
10770 | R | EcoZ151McrCP (100% identity) | Eco13C01McrCP | |
10775 | HNH endonuclease |