Escherichia coli RHB13-C02 |
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Putative Escherichia coli RHB13-C02 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,859,319 bp | CP057849 |
| plasmid pRHB13-C02_3: | 95,217 bp | CP057851 |
| plasmid pRHB13-C02_4: | 91,303 bp | CP057852 |
REBASE acronym: Eco13C02
Org_num: 43338
All begin HVW73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10730 | NADPH-dependent aldehyde reductase Ahr | |||
| 10740 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco13C02ORF10750P |
| 10745 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco13C02ORF10750P |
| 10750 | M | M.Eco13SOC03ORF10840P (100% identity) | RTCANNNNNNCTC | M.Eco13C02ORF10750P |
| 10755 | restriction endonuclease subunit M | |||
| 18390 | IS5-like element ISKpn26 family transposase | |||
| 18395 | R | Eco13SOC03ORF18540P (100% identity) | Eco13C02ORF18405P | |
| 18400 | S | S.SflN97ORF14060P (100% identity) | S.Eco13C02ORF18405P | |
| 18405 | M | M.SflN97ORF14060P (100% identity) | M.Eco13C02ORF18405P | |
| 18410 | GTPase family protein | |||
| plasmid pRHB13-C02_3 | ||||
| 24390 | type II toxin-antitoxin system Phd/YefM family | |||
| 24395 | M | M.EcoS321ORF25465P (100% identity) | M.Eco13C02ORF24395P | |
| 24400 | S | S.EcoMB50ORF22700P (100% identity) | S.Eco13C02ORF24395P | |
| 24405 | R | EcoS321ORF25465P (100% identity) | Eco13C02ORF24395P | |
| 24410 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 735 | phosphohydrolase | |||
| 740 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco13C02DcmP |
| 745 | V | V.SsoSE61DcmP (100% identity) | V.Eco13C02DcmP | |
| 750 | drug/metabolite exporter YedA | |||
| 5530 | phage lysis protein EssD | |||
| 5535 | M | M.Sso63633ORF22290P (100% identity) | M.Eco13C02ORF5535P | |
| 5540 | 67 aa hypothetical protein | |||
| 5570 | LexA family transcriptional regulator | |||
| 5575 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco13C02ORF5575P |
| 5580 | PerC family transcriptional regulator | |||
| 8725 | NinE family protein | |||
| 8730 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco13C02ORF8730P |
| 8735 | recombination protein NinB | |||
| 8830 | DUF1317 family protein | |||
| 8835 | M | M.Sbo812ORFAP (100% identity) | M.Eco13C02ORF8835P | |
| 8840 | 93 aa hypothetical protein | |||
| 10770 | McrC family protein | |||
| 10775 | R | EcoWCTORF19980P (100% identity) | Eco13C02ORF10775P | |
| 10780 | HNH endonuclease | |||
| 16705 | cell division protein DamX | |||
| 16710 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13C02DamP |
| 16715 | ribulose-phosphate 3-epimerase | |||
| 17260 | DUF2556 family protein | |||
| 17265 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco13C02ORF17265P |
| 17270 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB13-C02_3 | ||||
| 24500 | SPFH/Band 7/PHB domain protein | |||
| 24515 | M | M.Sen9860ORF25540P (100% identity) | M.Eco13C02ORF24515P | |
| 24520 | recombination-associated protein RdgC | |||
| plasmid pRHB13-C02_4 | ||||
| 24655 | 103 aa hypothetical protein | |||
| 24660 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco13C02ORF24660P |
| 24665 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10760 | IS3-like element IS3 family transposase | |||
| 10765 | R | SflSTLE4McrBP (100% identity) | Eco13C02McrBP | |
| 10770 | R | EcoZ151McrCP (100% identity) | Eco13C02McrCP | |
| 10775 | HNH endonuclease | |||