Escherichia coli RHB14-C15 |
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Putative Escherichia coli RHB14-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,950,306 bp | CP057812 |
| plasmid pRHB14-C15_2: | 127,110 bp | CP057813 |
| plasmid pRHB14-C15_3: | 108,954 bp | CP057814 |
| plasmid pRHB14-C15_4: | 97,994 bp | CP057815 |
| plasmid pRHB14-C15_5: | 80,510 bp | CP057816 |
REBASE acronym: Eco14C15
Org_num: 43348
All begin HVW94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17040 | transposase | |||
| 17045 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco14C15ORF17045P |
| 17050 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco14C15ORF17045P |
| 17055 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco14C15ORF17045P |
| 17060 | IS1 family transposase | |||
| plasmid pRHB14-C15_4 | ||||
| 25670 | type II toxin-antitoxin system Phd/YefM family | |||
| 25675 | M | M.Eco14C22ORF25665P (100% identity) | M.Eco14C15ORF25675P | |
| 25680 | S | S.Eco14C22ORF25665P (100% identity) | S.Eco14C15ORF25675P | |
| 25685 | R | Eco14C22ORF25665P (100% identity) | Eco14C15ORF25675P | |
| 25690 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5560 | 67 aa hypothetical protein | |||
| 5565 | M | M.EcoNC22ORF10915P (100% identity) | M.Eco14C15ORF5565P | |
| 5570 | 63 aa hypothetical protein | |||
| 9115 | phage replication protein | |||
| 9120 | M | M.EcoR31ORF20500P (100% identity) | M.Eco14C15ORF9120P | |
| 9125 | 343 aa hypothetical protein | |||
| 12155 | 401 aa hypothetical protein | |||
| 12160 | M | M.EcoVL02ORF18020P (100% identity) | M.Eco14C15ORF12160P | |
| 12165 | holin | |||
| 13610 | drug/metabolite exporter YedA | |||
| 13615 | V | V.EcosEC71DcmP (100% identity) | V.Eco14C15DcmP | |
| 13620 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.Eco14C15DcmP |
| 13625 | phosphohydrolase | |||
| 20590 | DNA-binding transcriptional regulator Fis | |||
| 20595 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco14C15ORF20595P |
| 20600 | DUF2556 family protein | |||
| 21215 | ribulose-phosphate 3-epimerase | |||
| 21220 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco14C15DamP |
| 21225 | cell division protein DamX | |||
| plasmid pRHB14-C15_2 | ||||
| 24530 | 73 aa hypothetical protein | |||
| 24535 | M | M.SflN92ORF24820P (100% identity) | M.Eco14C15ORF24535P | |
| 24540 | 101 aa hypothetical protein | |||
| plasmid pRHB14-C15_4 | ||||
| 25780 | tellurite/colicin resistance protein | |||
| 25795 | M | M.Eco14C22ORF25785P (100% identity) | M.Eco14C15ORF25795P | |
| 25800 | recombination-associated protein RdgC | |||
| plasmid pRHB14-C15_5 | ||||
| 25950 | 97 aa hypothetical protein | |||
| 25955 | M | M.Xca80ORFEP (100% identity) | M.Eco14C15ORF25955P | |
| 25960 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9165 | recombinase family protein | |||
| 9170 | R | EcoteDMcrBP (100% identity) | Eco14C15McrBP | |
| 9175 | R | EcosEC27McrCP (100% identity) | Eco14C15McrCP | |
| 9180 | isocitrate dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB14-C15_3 | ||||
| 25265 | 75 aa hypothetical protein | |||
| 25270 | M | M.Sso524ORF460P (100% identity) | M.Eco14C15ORF25270P | |
| 25275 | 269 aa hypothetical protein | |||