Escherichia coli RHB14-C07 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB14-C07 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,060,728 bp | CP057826 |
| plasmid pRHB14-C07_2: | 143,602 bp | CP057827 |
REBASE acronym: Eco14C07
Org_num: 43346
All begin HVW90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10725 | restriction endonuclease | |||
| 10730 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco14C07ORF10730P |
| 10735 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco14C07ORF10730P |
| 10740 | R | SdySWHE2ORF4295P (100% identity) | RTACNNNNGTG | Eco14C07ORF10730P |
| 10745 | endoribonuclease SymE | |||
| 23525 | 388 aa hypothetical protein | |||
| 23530 | M | M.EcoRG065ORF1045P (100% identity) | GATGNNNNNNTAC | M.Eco14C07ORF23530P |
| 23535 | S | S.EcoRG065ORF1045P (100% identity) | GATGNNNNNNTAC | S.Eco14C07ORF23530P |
| 23540 | YecA family protein | |||
| 23545 | cold shock domain-containing protein | |||
| 23550 | R | EcoRG065ORF1045P (99% identity) | GATGNNNNNNTAC | Eco14C07ORF23530P |
| 23555 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8920 | DUF1737 domain-containing protein | |||
| 8940 | M | M.EcoSHP24ORF23720P (100% identity) | M.Eco14C07ORF8940P | |
| 8945 | 67 aa hypothetical protein | |||
| 10930 | HNH endonuclease | |||
| 10935 | R | Eco32C15ORF11795P (100% identity) | Eco14C07ORF10935P | |
| 10940 | 332 aa hypothetical protein | |||
| 11090 | transposase | |||
| 11095 | M | M.EcoBG1ORFCP (100% identity) | M.Eco14C07ORF11095P | |
| 11100 | 407 aa hypothetical protein | |||
| 16115 | cell division protein DamX | |||
| 16120 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco14C07DamP |
| 16125 | ribulose-phosphate 3-epimerase | |||
| 16645 | DUF2556 family protein | |||
| 16650 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco14C07ORF16650P |
| 16655 | DNA-binding transcriptional regulator Fis | |||
| 23225 | phosphohydrolase | |||
| 23230 | M | M.Eco4978DcmP (100% identity) | CCWGG | M.Eco14C07DcmP |
| 23235 | V | V.EcoZYB62DcmP (100% identity) | V.Eco14C07DcmP | |
| 23240 | drug/metabolite exporter YedA | |||
| 23870 | TrmB family transcriptional regulator | |||
| 23875 | M | M.Esp10290ORF1489P (99% identity) | M.Eco14C07ORF23875P | |
| 23890 | DUF1737 domain-containing protein | |||
| plasmid pRHB14-C07_2 | ||||
| 24425 | 103 aa hypothetical protein | |||
| 24430 | M | M.SflFF87ORF23240P (99% identity) | M.Eco14C07ORF24430P | |
| 24435 | 73 aa hypothetical protein | |||