Escherichia coli RHB14-C22 |
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Putative Escherichia coli RHB14-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,950,418 bp | CP057796 |
| plasmid pRHB14-C22_2: | 127,110 bp | CP057797 |
| plasmid pRHB14-C22_3: | 108,954 bp | CP057798 |
| plasmid pRHB14-C22_4: | 97,994 bp | CP057799 |
| plasmid pRHB14-C22_5: | 80,510 bp | CP057800 |
REBASE acronym: Eco14C22
Org_num: 43352
All begin HVW98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17035 | transposase | |||
| 17040 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco14C22ORF17040P |
| 17045 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco14C22ORF17040P |
| 17050 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco14C22ORF17040P |
| 17055 | IS1 family transposase | |||
| plasmid pRHB14-C22_4 | ||||
| 25660 | type II toxin-antitoxin system Phd/YefM family | |||
| 25665 | M | M.Eco14C15ORF25675P (100% identity) | M.Eco14C22ORF25665P | |
| 25670 | S | S.Eco14C15ORF25675P (100% identity) | S.Eco14C22ORF25665P | |
| 25675 | R | Eco14C15ORF25675P (100% identity) | Eco14C22ORF25665P | |
| 25680 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5560 | 67 aa hypothetical protein | |||
| 5565 | M | M.EcoNC22ORF10915P (100% identity) | M.Eco14C22ORF5565P | |
| 5570 | 63 aa hypothetical protein | |||
| 9110 | phage replication protein | |||
| 9115 | M | M.EcoR31ORF20500P (100% identity) | M.Eco14C22ORF9115P | |
| 9120 | 343 aa hypothetical protein | |||
| 12150 | 401 aa hypothetical protein | |||
| 12155 | M | M.EcoVL02ORF18020P (100% identity) | M.Eco14C22ORF12155P | |
| 12160 | holin | |||
| 13605 | drug/metabolite exporter YedA | |||
| 13610 | V | V.EcosEC71DcmP (100% identity) | V.Eco14C22DcmP | |
| 13615 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.Eco14C22DcmP |
| 13620 | phosphohydrolase | |||
| 20585 | DNA-binding transcriptional regulator Fis | |||
| 20590 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco14C22ORF20590P |
| 20595 | DUF2556 family protein | |||
| 21210 | ribulose-phosphate 3-epimerase | |||
| 21215 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco14C22DamP |
| 21220 | cell division protein DamX | |||
| plasmid pRHB14-C22_2 | ||||
| 24525 | 73 aa hypothetical protein | |||
| 24530 | M | M.SflN92ORF24820P (100% identity) | M.Eco14C22ORF24530P | |
| 24535 | 101 aa hypothetical protein | |||
| plasmid pRHB14-C22_4 | ||||
| 25770 | tellurite/colicin resistance protein | |||
| 25785 | M | M.Eco14C15ORF25795P (100% identity) | M.Eco14C22ORF25785P | |
| 25790 | recombination-associated protein RdgC | |||
| plasmid pRHB14-C22_5 | ||||
| 25940 | 97 aa hypothetical protein | |||
| 25945 | M | M.Xca80ORFEP (100% identity) | M.Eco14C22ORF25945P | |
| 25950 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9160 | recombinase family protein | |||
| 9165 | R | EcoteDMcrBP (100% identity) | Eco14C22McrBP | |
| 9170 | R | EcosEC27McrCP (100% identity) | Eco14C22McrCP | |
| 9175 | isocitrate dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB14-C22_3 | ||||
| 25255 | 75 aa hypothetical protein | |||
| 25260 | M | M.Sso524ORF460P (100% identity) | M.Eco14C22ORF25260P | |
| 25265 | 269 aa hypothetical protein | |||