Escherichia coli RHB15-C07 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB15-C07 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,102,610 bp | CP057784 |
| plasmid pRHB15-C07_2: | 191,949 bp | CP057785 |
| plasmid pRHB15-C07_3: | 68,933 bp | CP057786 |
REBASE acronym: Eco15C07
Org_num: 43354
All begin HVX01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19290 | 428 aa hypothetical protein | |||
| 19295 | S | S.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | S.Eco15C07ORF19300P |
| 19300 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco15C07ORF19300P |
| 19305 | 128 aa hypothetical protein | |||
| plasmid pRHB15-C07_2 | ||||
| 25755 | 62 aa hypothetical protein | |||
| 25760 | R | Eco15C23ORF25755P (100% identity) | Eco15C07ORF25765P | |
| 25765 | M | M.SenS1545ORF24780P (100% identity) | M.Eco15C07ORF25765P | |
| 25770 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1420 | TrmB family transcriptional regulator | |||
| 1425 | M | M.Eco15C23ORF1425P (100% identity) | M.Eco15C07ORF1425P | |
| 1430 | tellurite resistance TerB family protein | |||
| 6205 | drug/metabolite exporter YedA | |||
| 6210 | V | V.SsoSE61DcmP (100% identity) | V.Eco15C07DcmP | |
| 6215 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco15C07DcmP |
| 6220 | phosphohydrolase | |||
| 13200 | DNA-binding transcriptional regulator Fis | |||
| 13205 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco15C07ORF13205P |
| 13210 | DUF2556 family protein | |||
| 13755 | ribulose-phosphate 3-epimerase | |||
| 13760 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco15C07DamP |
| 13765 | cell division protein DamX | |||
| 19315 | AAA family ATPase | |||
| 19320 | R | SflN101ORF11875P (100% identity) | Eco15C07ORF19320P | |
| 19325 | HNH endonuclease | |||
| 24225 | TraR/DksA family transcriptional regulator | |||
| 24230 | M | M.EfeC18ORF7705P (100% identity) | M.Eco15C07ORF24230P | |
| 24235 | 273 aa hypothetical protein | |||
| plasmid pRHB15-C07_2 | ||||
| 25415 | 101 aa hypothetical protein | |||
| 25420 | M | M.Eco15C23ORF25410P (100% identity) | M.Eco15C07ORF25420P | |
| 25425 | 73 aa hypothetical protein | |||
| plasmid pRHB15-C07_3 | ||||
| 25850 | 103 aa hypothetical protein | |||
| 25855 | M | M.Kpn1026ORFJP (100% identity) | M.Eco15C07ORF25855P | |
| 25860 | DUF1380 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19305 | 128 aa hypothetical protein | |||
| 19310 | R | Ecows53McrCP (100% identity) | Eco15C07McrCP | |
| 19315 | R | EcoSMBLMcrBP (100% identity) | Eco15C07McrBP | |
| 19320 | HNH endonuclease | |||