Escherichia coli RHB14-C23 |
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Putative Escherichia coli RHB14-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,875,147 bp | CP057790 |
| plasmid pRHB14-C23_2: | 187,580 bp | CP057791 |
| plasmid pRHB14-C23_3: | 131,416 bp | CP057792 |
REBASE acronym: Eco14C23
Org_num: 43353
All begin HVW99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2695 | endoribonuclease SymE | |||
| 2700 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | Eco14C23ORF2710P |
| 2705 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.Eco14C23ORF2710P |
| 2710 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.Eco14C23ORF2710P |
| 2715 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.SflFF22ORF10P (100% identity) | M.Eco14C23ORF15P | |
| 20 | R | Eho218ORF15P (100% identity) | Eco14C23ORF15P | |
| 25 | phage portal protein | |||
| 2510 | 59 aa hypothetical protein | |||
| 2515 | R | SflFF17ORF19275P (100% identity) | Eco14C23ORF2515P | |
| 2520 | HNH endonuclease | |||
| 13280 | drug/metabolite exporter YedA | |||
| 13285 | V | V.SflC32DcmP (74% identity) | V.Eco14C23DcmP | |
| 13290 | M | M.EcoS792DcmP (100% identity) | CCWGG | M.Eco14C23DcmP |
| 13295 | phosphohydrolase | |||
| 20160 | DNA-binding transcriptional regulator Fis | |||
| 20165 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco14C23ORF20165P |
| 20170 | DUF2556 family protein | |||
| 20775 | ribulose-phosphate 3-epimerase | |||
| 20780 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco14C23DamP |
| 20785 | cell division protein DamX | |||
| plasmid pRHB14-C23_2 | ||||
| 24365 | 73 aa hypothetical protein | |||
| 24370 | M | M.Xca80ORFEP (100% identity) | M.Eco14C23ORF24370P | |
| 24375 | 97 aa hypothetical protein | |||
| plasmid pRHB14-C23_3 | ||||
| 25045 | 101 aa hypothetical protein | |||
| 25050 | M | M.EcoP006ORF270P (100% identity) | M.Eco14C23ORF25050P | |
| 25055 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8935 | recombinase family protein | |||
| 8940 | R | EcoSW4848GmrSD2P (100% identity) | Eco14C23GmrSDP | |
| 8945 | isocitrate dehydrogenase | |||