Escherichia coli RHB15-C22 |
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Putative Escherichia coli RHB15-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,948,222 bp | CP057773 |
| plasmid pRHB15-C22_2: | 129,793 bp | CP057774 |
| plasmid pRHB15-C22_3: | 68,614 bp | CP057775 |
REBASE acronym: Eco15C22
Org_num: 43356
All begin HVX09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11870 | DUF262 domain-containing protein | |||
| 11875 | M | M.Ecos135ORF4680P (100% identity) | M.Eco15C22ORF11875P | |
| 11880 | S | S.Ecos135ORF4680P (100% identity) | S.Eco15C22ORF11875P | |
| 11885 | R | Ecos135ORF4680P (100% identity) | Eco15C22ORF11875P | |
| 11890 | 237 aa hypothetical protein | |||
| 12080 | N-6 DNA methylase | |||
| 12085 | R | EcoR47ORF16440P (100% identity) | Eco15C22ORF12095P | |
| 12090 | S | S.EcoR47ORF16440P (100% identity) | S.Eco15C22ORF12095P | |
| 12095 | M | M2.EcoR47ORF16440P (100% identity) | M2.Eco15C22ORF12095P | |
| 12100 | M | M1.EcoR47ORF16440P (100% identity) | M1.Eco15C22ORF12095P | |
| 12105 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 795 | phosphohydrolase | |||
| 800 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco15C22DcmP |
| 805 | V | V.Ecostr9DcmP (74% identity) | V.Eco15C22DcmP | |
| 810 | drug/metabolite exporter YedA | |||
| 6745 | LexA family transcriptional regulator | |||
| 6750 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco15C22ORF6750P |
| 6755 | PerC family transcriptional regulator | |||
| 8140 | NinE family protein | |||
| 8145 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco15C22ORF8145P |
| 8150 | recombination protein NinB | |||
| 16920 | cell division protein DamX | |||
| 16925 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco15C22DamP |
| 16930 | ribulose-phosphate 3-epimerase | |||
| 17450 | DUF2556 family protein | |||
| 17455 | M | M.EcoR47ORF4025P (100% identity) | ATGCAT | M.Eco15C22ORF17455P |
| 17460 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB15-C22_2 | ||||
| 23900 | 103 aa hypothetical protein | |||
| 23905 | M | M.SspPIBORF23080P (100% identity) | M.Eco15C22ORF23905P | |
| 23910 | 73 aa hypothetical protein | |||
| plasmid pRHB15-C22_3 | ||||
| 24395 | 102 aa hypothetical protein | |||
| 24400 | M | M.SenST46ORF25580P (100% identity) | M.Eco15C22ORF24400P | |
| 24405 | 69 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11865 | cell filamentation protein Fic | |||
| 11870 | R | EcoTHYM1GmrSDP (100% identity) | Eco15C22GmrDP | |
| 11875 | SAM-dependent DNA methyltransferase | |||