Escherichia coli RHB16-C14 |
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Putative Escherichia coli RHB16-C14 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,833,960 bp | CP057729 |
| plasmid pRHB16-C14_2: | 266,854 bp | CP057730 |
REBASE acronym: Eco16C14
Org_num: 43362
All begin HVX21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19990 | ash family protein | |||
| 19995 | S | S.EcoDEC7BORF344P (100% identity) | S.Eco16C14ORF20000P | |
| 20000 | M | M.EcoDEC7BORF344P (100% identity) | M.Eco16C14ORF20000P | |
| 20005 | R | EcoDEC7BORF344P (100% identity) | Eco16C14ORF20000P | |
| 20010 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5500 | drug/metabolite exporter YedA | |||
| 5505 | V | V.SsoSE61DcmP (100% identity) | V.Eco16C14DcmP | |
| 5510 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco16C14DcmP |
| 5515 | phosphohydrolase | |||
| 7815 | NinE family protein | |||
| 7820 | M | M.SflWW1ORF7070P (98% identity) | GATC | M.Eco16C14ORF7820P |
| 7825 | recombination protein NinB | |||
| 12695 | DNA-binding transcriptional regulator Fis | |||
| 12700 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco16C14ORF12700P |
| 12705 | DUF2556 family protein | |||
| 13320 | ribulose-phosphate 3-epimerase | |||
| 13325 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco16C14DamP |
| 13330 | cell division protein DamX | |||
| 19750 | PerC family transcriptional regulator | |||
| 19755 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco16C14ORF19755P |
| 19760 | LexA family transcriptional regulator | |||
| 19965 | 257 aa hypothetical protein | |||
| 19970 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco16C14ORF19970P | |
| 19975 | R | Sso8033ORF3755P (100% identity) | Eco16C14ORF19970P | |
| 19980 | helix-turn-helix domain-containing protein | |||
| 22800 | TraR/DksA family transcriptional regulator | |||
| 22805 | M | M.Eco883493ORFBP (100% identity) | GATC | M.Eco16C14ORF22805P |
| 22810 | replication endonuclease | |||
| plasmid pRHB16-C14_2 | ||||
| 24020 | 55 aa hypothetical protein | |||
| 24025 | M | M.YpsF1ORFCP (100% identity) | M.Eco16C14ORF24025P | |
| 24030 | thermonuclease family protein | |||
| 24365 | 202 aa hypothetical protein | |||
| 24370 | M | M.YpsF1ORFBP (100% identity) | M.Eco16C14ORF24370P | |
| 24375 | 48 aa hypothetical protein | |||
| 24665 | DNA-binding protein | |||
| 24670 | M | M.SenBL10ORFDP (100% identity) | M.Eco16C14ORF24670P | |
| 24675 | 284 aa hypothetical protein | |||