Escherichia coli RHB16-C19 |
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Putative Escherichia coli RHB16-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,823,658 bp | CP057725 |
| plasmid pRHB16-C19_2: | 285,423 bp | CP057726 |
| plasmid pRHB16-C19_3: | 48,056 bp | CP057727 |
REBASE acronym: Eco16C19
Org_num: 43363
All begin HVX22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19915 | DUF262 domain-containing protein | |||
| 19920 | R | EcoXH993ORF23720P (100% identity) | Eco16C19ORF19925P | |
| 19925 | M | M.EcoZ503ORFCP (97% identity) | M.Eco16C19ORF19925P | |
| 19930 | S | S.Ecoa005ORF2260P (100% identity) | S.Eco16C19ORF19925P | |
| 19935 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1605 | cell division protein DamX | |||
| 1610 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco16C19DamP |
| 1615 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco16C19ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 3290 | DEAD/DEAH box helicase | |||
| 3295 | RM | SflLIN17ORF3140P (100% identity) | Eco16C19ORF3295P | |
| 3300 | transposase | |||
| 9215 | phosphohydrolase | |||
| 9220 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco16C19DcmP |
| 9225 | V | V.SsoSE61DcmP (100% identity) | V.Eco16C19DcmP | |
| 9230 | drug/metabolite exporter YedA | |||
| 11160 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco16C19ORF11165P | |
| 11170 | 60 aa hypothetical protein | |||
| 15125 | replication endonuclease | |||
| 15130 | M | M.Eco5781ORF24105P (72% identity) | M.Eco16C19ORF15130P | |
| 15135 | DUF2732 family protein | |||
| 16695 | DUF1317 family protein | |||
| 16700 | M | M.Sbo812ORFAP (100% identity) | M.Eco16C19ORF16700P | |
| 16705 | cell division protein ZapA | |||
| 20110 | HNH endonuclease | |||
| 20115 | R | R1.EcoXH993ORF23960P (100% identity) | R1.Eco16C19ORF20120P | |
| 20120 | M | M.EcoXH993ORF23960P (100% identity) | M.Eco16C19ORF20120P | |
| 20125 | R | R2.EcoXH993ORF23960P (98% identity) | R2.Eco16C19ORF20120P | |
| 20130 | transposase | |||
| plasmid pRHB16-C19_2 | ||||
| 24300 | 55 aa hypothetical protein | |||
| 24305 | M | M.YpsF1ORFCP (100% identity) | M.Eco16C19ORF24305P | |
| 24310 | thermonuclease family protein | |||
| 24770 | 48 aa hypothetical protein | |||
| 24775 | M | M.YpsF1ORFBP (100% identity) | M.Eco16C19ORF24775P | |
| 24780 | 202 aa hypothetical protein | |||
| 24955 | DNA-binding protein | |||
| 24960 | M | M.SenBL10ORFDP (100% identity) | M.Eco16C19ORF24960P | |
| 24965 | 284 aa hypothetical protein | |||
| plasmid pRHB16-C19_3 | ||||
| 25195 | 89 aa hypothetical protein | |||
| 25200 | M | M.Eco2E3C03ORF25705P (100% identity) | M.Eco16C19ORF25200P | |
| 25210 | 92 aa hypothetical protein | |||