Escherichia coli RHB17-C02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB17-C02 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,697,686 bp | CP057713 |
| plasmid pRHB17-C02_2: | 221,175 bp | CP057714 |
| plasmid pRHB17-C02_4: | 69,882 bp | CP057716 |
REBASE acronym: Eco17C02
Org_num: 43365
All begin HVX25_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco17C02DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.Eco17C02ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 5490 | PerC family transcriptional regulator | |||
| 5495 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.Eco17C02ORF5495P |
| 5500 | LexA family transcriptional regulator | |||
| 5525 | 67 aa hypothetical protein | |||
| 5530 | M | M.EcoP61ORF17815P (100% identity) | M.Eco17C02ORF5530P | |
| 5535 | phage holin, lambda family | |||
| 8970 | phosphohydrolase | |||
| 8975 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco17C02DcmP |
| 8980 | V | V.Eco11C04DcmP (100% identity) | V.Eco17C02DcmP | |
| 8985 | drug/metabolite exporter YedA | |||
| 19505 | HNH endonuclease | |||
| 19510 | R | EcoWCTORF19980P (100% identity) | Eco17C02ORF19510P | |
| 19515 | 332 aa hypothetical protein | |||
| 19530 | BREX system P-loop protein BrxC | |||
| 19535 | RM | EcoDEC14DORF5061P (100% identity) | Eco17C02ORF19535P | |
| 19540 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pRHB17-C02_2 | ||||
| 22965 | 56 aa hypothetical protein | |||
| 22970 | M | M.Sens770ORF21675P (100% identity) | M.Eco17C02ORF22970P | |
| 22975 | thermonuclease family protein | |||
| 23595 | DNA-binding protein | |||
| 23600 | M | M.Ype21801ORF197P (100% identity) | M.Eco17C02ORF23600P | |
| 23605 | 273 aa hypothetical protein | |||
| plasmid pRHB17-C02_4 | ||||
| 24495 | 76 aa hypothetical protein | |||
| 24500 | M | M.Eco11C04ORF24150P (100% identity) | M.Eco17C02ORF24500P | |
| 24505 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB17-C02_4 | ||||
| 24155 | DUF4391 domain-containing protein | |||
| 24160 | M | M.Eco11C04ORF23810P (100% identity) | M.Eco17C02ORF24160P | |
| 24165 | R | Eco11C04ORF23810P (100% identity) | Eco17C02ORF24160P | |
| 24170 | recombinase RecA | |||