Escherichia coli RHB18-C09 |
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Putative Escherichia coli RHB18-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,832,031 bp | CP057677 |
| plasmid pRHB18-C09_2: | 143,708 bp | CP057678 |
| plasmid pRHB18-C09_3: | 6,760 bp | CP057679 |
REBASE acronym: Eco18C09
Org_num: 43284
All begin HVX37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12215 | IS3-like element IS3 family transposase | |||
| 12220 | R | SdyFF10ORF20075P (100% identity) | Eco18C09ORF12220P | |
| 12230 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 930 | TrmB family transcriptional regulator | |||
| 935 | M | M.Eco42C22ORF1045P (100% identity) | M.Eco18C09ORF935P | |
| 945 | holin | |||
| 1245 | phosphohydrolase | |||
| 1250 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco18C09DcmP |
| 1255 | V | V.SsoSE61DcmP (100% identity) | V.Eco18C09DcmP | |
| 1260 | drug/metabolite exporter YedA | |||
| 12195 | HNH endonuclease | |||
| 12200 | R | SdyFF10ORF20055P (100% identity) | Eco18C09ORF12200P | |
| 12205 | McrC family protein | |||
| 16815 | cell division protein DamX | |||
| 16820 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco18C09DamP |
| 16825 | ribulose-phosphate 3-epimerase | |||
| 17345 | DUF2556 family protein | |||
| 17350 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco18C09ORF17350P |
| 17355 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB18-C09_2 | ||||
| 23850 | 73 aa hypothetical protein | |||
| 23855 | M | M.Sen4346ORF22715P (100% identity) | M.Eco18C09ORF23855P | |
| 23860 | 89 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB18-C09_3 | ||||
| 23985 | Rop family plasmid primer RNA-binding protein | |||
| 23990 | M | M.SenL0047ORF24180P (100% identity) | M.Eco18C09ORF23990P | |
| 23980 | R | SenL0047ORF24180P (100% identity) | Eco18C09ORF23990P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12200 | HNH endonuclease | |||
| 12205 | R | SdyFF10McrCP (100% identity) | Eco18C09McrCP | |
| 12210 | R | SflSTLE4McrBP (100% identity) | Eco18C09McrBP | |
| 12215 | IS3-like element IS3 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7030 | replication endonuclease | |||
| 7035 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco18C09ORF7035P |
| 7040 | TraR/DksA family transcriptional regulator | |||