Escherichia coli RHB18-C12 |
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Putative Escherichia coli RHB18-C12 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,165,894 bp | CP057673 |
| plasmid pRHB18-C12_2: | 116,753 bp | CP057674 |
| plasmid pRHB18-C12_3: | 5,686 bp | CP057675 |
REBASE acronym: Eco18C12
Org_num: 43285
All begin HVX39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19125 | endoribonuclease SymE | |||
| 19130 | R | Eco32C15ORF11590P (100% identity) | Eco18C12ORF19140P | |
| 19135 | S | S.Eco16309ORFBP (100% identity) | S.Eco18C12ORF19140P | |
| 19140 | M | M.Eco38C15ORF12050P (100% identity) | M.Eco18C12ORF19140P | |
| 19145 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3885 | 92 aa hypothetical protein | |||
| 3890 | M | M.EcoV04ORF12550P (100% identity) | M.Eco18C12ORF3890P | |
| 3895 | TrmB family transcriptional regulator | |||
| 6230 | drug/metabolite exporter YedA | |||
| 6235 | V | V.EcoR42DcmP (99% identity) | V.Eco18C12DcmP | |
| 6240 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco18C12DcmP |
| 6245 | phosphohydrolase | |||
| 9865 | replication endonuclease | |||
| 9870 | M | M.SdyFF10ORF5495P (100% identity) | GATC | M.Eco18C12ORF9870P |
| 9875 | TraR/DksA family transcriptional regulator | |||
| 13590 | DNA-binding transcriptional regulator Fis | |||
| 13595 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco18C12ORF13595P |
| 13600 | DUF2556 family protein | |||
| 14145 | ribulose-phosphate 3-epimerase | |||
| 14150 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco18C12DamP |
| 14155 | cell division protein DamX | |||
| 18930 | 59 aa hypothetical protein | |||
| 18935 | R | EcoC6335ORF21785P (100% identity) | Eco18C12ORF18935P | |
| 18940 | HNH endonuclease | |||
| 21220 | cell division protein ZapA | |||
| 21225 | M | M.Sbo812ORFAP (100% identity) | M.Eco18C12ORF21225P | |
| 21230 | DUF1317 family protein | |||
| plasmid pRHB18-C12_2 | ||||
| 25160 | 73 aa hypothetical protein | |||
| 25165 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco18C12ORF25165P | |
| 25170 | 103 aa hypothetical protein | |||
| plasmid pRHB18-C12_3 | ||||
| 25260 | R | SenS1677ORF24360P (100% identity) | CCWWGG | Eco18C12ORF25255P |
| 25265 | Rop family plasmid primer RNA-binding protein | |||
| 25270 | MobC family plasmid mobilization relaxosome | |||
| 25275 | relaxase/mobilization nuclease domain-containing | |||
| 25280 | MbeB family mobilization protein | |||
| 25285 | MbeD family mobilization/exclusion protein | |||
| 25255 | M | M.SenS1677ORF24360P (100% identity) | CCWWGG | M.Eco18C12ORF25255P |