Escherichia coli RHB19-C13 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB19-C13 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,089,337 bp | CP057645 |
| plasmid pRHB19-C13_2: | 148,142 bp | CP057646 |
REBASE acronym: Eco19C13
Org_num: 43290
All begin HVX51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21060 | 128 aa hypothetical protein | |||
| 21065 | M | M.EcoSTEC866ORF20040P (100% identity) | M.Eco19C13ORF21065P | |
| 21070 | S | S.EcoSTEC640ORF20915P (100% identity) | S.Eco19C13ORF21065P | |
| 21075 | 433 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2195 | cell division protein DamX | |||
| 2200 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco19C13DamP |
| 2205 | ribulose-phosphate 3-epimerase | |||
| 2750 | DUF2556 family protein | |||
| 2755 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco19C13ORF2755P |
| 2760 | DNA-binding transcriptional regulator Fis | |||
| 6520 | antitermination protein | |||
| 6525 | M | M2.EcosS3ORF2905P (100% identity) | M.Eco19C13ORF6525P | |
| 6530 | R | R2.EcosS3ORF2905P (100% identity) | Eco19C13ORF6525P | |
| 6535 | DUF262 domain-containing protein | |||
| 6540 | TrmB family transcriptional regulator | |||
| 6545 | M | M.Eco45S0C06ORF14065P (98% identity) | M.Eco19C13ORF6545P | |
| 6560 | holin | |||
| 9790 | phosphohydrolase | |||
| 9795 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco19C13DcmP |
| 9800 | V | V.SflFF64DcmP (100% identity) | V.Eco19C13DcmP | |
| 9805 | drug/metabolite exporter YedA | |||
| 11820 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco19C13ORF11825P | |
| 11830 | 60 aa hypothetical protein | |||
| 14490 | 72 aa hypothetical protein | |||
| 14495 | M | M.CspS39ORF14085P (100% identity) | M.Eco19C13ORF14495P | |
| 14500 | 147 aa hypothetical protein | |||
| 14560 | ead/Ea22-like family protein | |||
| 14565 | M | M.Cfr3863ORF9805P (69% identity) | M.Eco19C13ORF14565P | |
| 14570 | excisionase | |||
| 16210 | replication endonuclease | |||
| 16215 | M | M.Ecos671ORFBP (99% identity) | GATC | M.Eco19C13ORF16215P |
| 16220 | TraR/DksA family transcriptional regulator | |||
| 21040 | sialate O-acetylesterase | |||
| 21045 | R | EcosB2CORFAP (100% identity) | Eco19C13ORF21045P | |
| 21050 | AAA family ATPase | |||
| plasmid pRHB19-C13_2 | ||||
| 24955 | 103 aa hypothetical protein | |||
| 24960 | M | M.Eco45S0C06ORF24735P (100% identity) | M.Eco19C13ORF24960P | |
| 24965 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21045 | HNH endonuclease | |||
| 21050 | R | SflN101McrBP (100% identity) | Eco19C13McrBP | |
| 21055 | R | EcoSO63McrCP (100% identity) | Eco19C13McrCP | |
| 21060 | 128 aa hypothetical protein | |||