Escherichia coli RHB20-C18 |
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Putative Escherichia coli RHB20-C18 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,078,610 bp | CP057621 |
| plasmid pRHB20-C18_2: | 116,595 bp | CP057622 |
| plasmid pRHB20-C18_3: | 97,938 bp | CP057623 |
REBASE acronym: Eco20C18
Org_num: 43297
All begin HVX66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6205 | 58 aa hypothetical protein | |||
| 6210 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco20C18ORF6210P |
| 6215 | S | S.Ecos1613ORF5225P (99% identity) | CCAYNNNNNGTTY | S.Eco20C18ORF6210P |
| 6220 | DUF4433 domain-containing protein | |||
| 6225 | macro domain-containing protein | |||
| 6230 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | Eco20C18ORF6210P |
| 6235 | M48 family metallopeptidase | |||
| 12295 | DUF45 domain-containing protein | |||
| 12300 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco20C18ORF12300P | |
| 12305 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco20C18ORF12300P | |
| 12310 | 61 aa hypothetical protein | |||
| 13050 | AAA family ATPase | |||
| 13055 | S | S.Eco26C21ORF22040P (100% identity) | TGANNNNNNCTTC | S.Eco20C18ORF13060P |
| 13060 | M | M.EcoW087ORF21705P (100% identity) | TGANNNNNNCTTC | M.Eco20C18ORF13060P |
| 13065 | R | EcoW087ORF21705P (100% identity) | TGANNNNNNCTTC | Eco20C18ORF13060P |
| 13070 | DUF600 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 915 | phosphohydrolase | |||
| 920 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.Eco20C18DcmP |
| 925 | V | V.SsoSE61DcmP (100% identity) | V.Eco20C18DcmP | |
| 930 | drug/metabolite exporter YedA | |||
| 4900 | holin | |||
| 4910 | M | M.EcoRG044ORF14035P (98% identity) | M.Eco20C18ORF4910P | |
| 4915 | TrmB family transcriptional regulator | |||
| 4920 | DUF262 domain-containing protein | |||
| 4925 | R | R2.EcosS3ORF2905P (100% identity) | Eco20C18ORF4930P | |
| 4930 | M | M2.EcosS3ORF2905P (99% identity) | M.Eco20C18ORF4930P | |
| 4935 | antitermination protein | |||
| 12230 | HNH endonuclease | |||
| 12235 | R | Ecosa15ORFAP (96% identity) | Eco20C18ORF12235P | |
| 12240 | 332 aa hypothetical protein | |||
| 12255 | BREX system P-loop protein BrxC | |||
| 12260 | RM | Ecoppa10ORF1735P (100% identity) | ACCYAC | Eco20C18ORF12260P |
| 12265 | BREX-1 system phosphatase PglZ type A | |||
| 17165 | cell division protein DamX | |||
| 17170 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco20C18DamP |
| 17175 | ribulose-phosphate 3-epimerase | |||
| 17720 | DUF2556 family protein | |||
| 17725 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco20C18ORF17725P |
| 17730 | DNA-binding transcriptional regulator Fis | |||
| 23945 | TrmB family transcriptional regulator | |||
| 23950 | M | M.EcoEC11ORF25220P (100% identity) | M.Eco20C18ORF23950P | |
| 23955 | 163 aa hypothetical protein | |||
| plasmid pRHB20-C18_2 | ||||
| 24810 | 73 aa hypothetical protein | |||
| 24815 | M | M.SflN92ORF24820P (100% identity) | M.Eco20C18ORF24815P | |
| 24820 | 101 aa hypothetical protein | |||
| plasmid pRHB20-C18_3 | ||||
| 25385 | tellurite resistance TerB family protein | |||
| 25400 | M | M.EcoH8ORF24485P (100% identity) | M.Eco20C18ORF25400P | |
| 25405 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB20-C18_3 | ||||
| 25125 | modulator protein | |||
| 25130 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.Eco20C18ORF25130P |
| 25135 | R | Sen68045ORF16165P (99% identity) | AGACC | Eco20C18ORF25130P |
| 25140 | maturation control protein | |||