Escherichia coli RHB21-C03 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB21-C03 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,057,517 bp | CP057615 |
| plasmid pRHB21-C03_2: | 122,712 bp | CP057616 |
REBASE acronym: Eco21C03
Org_num: 43299
All begin HVX70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18215 | toprim domain-containing protein | |||
| 18220 | R | Eco26C18ORF18230P (100% identity) | Eco21C03ORF18230P | |
| 18225 | S | S.Eco26C18ORF18230P (100% identity) | S.Eco21C03ORF18230P | |
| 18230 | M | M.Eco26C18ORF18230P (100% identity) | M.Eco21C03ORF18230P | |
| 18235 | DUF4942 domain-containing protein | |||
| 18440 | 237 aa hypothetical protein | |||
| 18445 | R | Eco26C18ORF18455P (100% identity) | Eco21C03ORF18455P | |
| 18450 | S | S.Eco43SEC07ORF20635P (100% identity) | S.Eco21C03ORF18455P | |
| 18455 | M | M.Eco43SEC07ORF20635P (100% identity) | M.Eco21C03ORF18455P | |
| 18460 | DUF262 domain-containing protein | |||
| 20490 | ash family protein | |||
| 20495 | S | S.Eco4151ORFAP (100% identity) | S.Eco21C03ORF20500P | |
| 20500 | M | M.Eco26C18ORF20500P (100% identity) | M.Eco21C03ORF20500P | |
| 20505 | R | Eco26C18ORF20500P (100% identity) | Eco21C03ORF20500P | |
| 20510 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5625 | drug/metabolite exporter YedA | |||
| 5630 | V | V.SsoSE61DcmP (100% identity) | V.Eco21C03DcmP | |
| 5635 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco21C03DcmP |
| 5640 | phosphohydrolase | |||
| 12500 | DNA-binding transcriptional regulator Fis | |||
| 12505 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco21C03ORF12505P |
| 12510 | DUF2556 family protein | |||
| 13055 | ribulose-phosphate 3-epimerase | |||
| 13060 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco21C03DamP |
| 13065 | cell division protein DamX | |||
| 18245 | McrC family protein | |||
| 18250 | R | Eco26C18ORF18250P (100% identity) | Eco21C03ORF18250P | |
| 18255 | HNH endonuclease | |||
| 23380 | TraR/DksA family transcriptional regulator | |||
| 23385 | M | M.Eco26C18ORF23385P (100% identity) | GATC | M.Eco21C03ORF23385P |
| 23390 | replication endonuclease | |||
| plasmid pRHB21-C03_2 | ||||
| 24450 | 73 aa hypothetical protein | |||
| 24455 | M | M.SflN92ORF24820P (100% identity) | M.Eco21C03ORF24455P | |
| 24460 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18235 | DUF4942 domain-containing protein | |||
| 18240 | R | Eco26C18McrBP (100% identity) | Eco21C03McrBP | |
| 18245 | R | Eco26C18McrCP (100% identity) | Eco21C03McrCP | |
| 18250 | HNH endonuclease | |||
| 18455 | SAM-dependent DNA methyltransferase | |||
| 18460 | R | Eco6968GmrSDP (100% identity) | Eco21C03GmrSDP | |
| 18465 | cell filamentation protein Fic | |||